RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 SYDE1Q6ZW31 735 aaPredicted RBP9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 ANKRD23Q86SG2 305 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 PHF13Q86YI8 300 aaPredicted RBP9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 SEMA4DQ92854 862 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 CD101Q93033 1021 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 ZDHHC16Q969W1 377 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 CCDC127Q96BQ5 260 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 OPTNQ96CV9 577 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 FGD4Q96M96 766 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 PHOX2BQ99453 314 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 FAM213AQ9BRX8 229 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 MSTO1Q9BUK6 570 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 ADAM33Q9BZ11 813 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 TSPYL1Q9H0U9 437 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 FZD8Q9H461 694 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 MRPL47Q9HD33 250 aaKnown RBP9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 ZCCHC17Q9NP64 241 aaKnown RBP9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 HOMER3Q9NSC5 361 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 ERAP1Q9NZ08 941 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 PCYOX1Q9UHG3 505 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 MTUS1Q9ULD2 1270 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 PCDHA3Q9Y5H8 950 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 ALG6Q9Y672 507 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 CNTNAP2Q9UHC6 1331 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 ANK1P16157 1881 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 RALGAPA2Q2PPJ7 1873 aa9.49□□□□□ -0.89
PPP4R1-213ENST00000579609 ACKR2O00590 384 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 NDC80O14777 642 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 CYP26A1O43174 497 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 FAM189A1O60320 539 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 GRIN3BO60391 1043 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 ERLIN2O94905 339 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 SGPL1O95470 568 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 ASS1P00966 412 aaKnown RBP9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 CLTAP09496 248 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 HOXD8P13378 290 aaPredicted RBP9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 TNNI1P19237 187 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 PIK3CAP42336 1068 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 TNNT3P45378 269 aaPredicted RBP9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 FNTAP49354 379 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 GTF2A2P52657 109 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 SGSM1Q2NKQ1 1148 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 LIN9Q5TKA1 542 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 C9orf131Q5VYM1 1079 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 MPZL3Q6UWV2 235 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 APBB1IPQ7Z5R6 666 aaPredicted RBP9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 UBR7Q8N806 425 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 GPRC5AQ8NFJ5 357 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 ZNF564Q8TBZ8 553 aaPredicted RBP9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 SLC20A1Q8WUM9 679 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 ARHGEF26Q96DR7 871 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 RNPC3Q96LT9 517 aaKnown RBP9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 TSPAN18Q96SJ8 248 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 RUFY1Q96T51 708 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 KRT12Q99456 494 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 ACO2Q99798 780 aaKnown RBP9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 SYT17Q9BSW7 474 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 KIFC3Q9BVG8 833 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 SEPT11Q9NVA2 429 aaKnown RBP9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 PRMT7Q9NVM4 692 aaPredicted RBP9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 FEZ2Q9UHY8 353 aaPredicted RBP9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 ADAM21Q9UKJ8 722 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 TNFSF13BQ9Y275 285 aa9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 UTP11Q9Y3A2 253 aaKnown RBP9.48□□□□□ -0.89
PPP4R1-213ENST00000579609 ABLIM1O14639 778 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 RAD51CO43502 376 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 PSTPIP1O43586 416 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 PHF2O75151 1096 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 STAU1O95793 577 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 GH1P01241 217 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 PRKCBP05771 671 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 GLI1P08151 1106 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 MYBL2P10244 700 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 DLATP10515 647 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 MCF2P10911 925 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 ACO1P21399 889 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 ABCB4P21439 1286 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 ATICP31939 592 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 CDH5P33151 784 aaPredicted RBP9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 PHKA2P46019 1235 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 NSFP46459 744 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 PEX5P50542 639 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 ZNF132P52740 706 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 GSCP56915 257 aaPredicted RBP9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 RWDD2BP57060 319 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 NLRP11P59045 1033 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 NOP14P78316 857 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 GUCY2DQ02846 1103 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 LAMTOR4Q0VGL1 99 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 PLCB4Q15147 1175 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 DUOXA2Q1HG44 320 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 ZNF792Q3KQV3 632 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 TDRD10Q5VZ19 366 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 SND1Q7KZF4 910 aaKnown RBP eCLIP9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 SLC47A2Q86VL8 602 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 MCOLN2Q8IZK6 566 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 IQCKQ8N0W5 287 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 LINC01465Q8N7H1 131 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 PPTC7Q8NI37 304 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms