RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 DNM2P50570 870 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 ROR1Q01973 937 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 TRDNQ13061 729 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 SEMA3BQ13214 749 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 NAB2Q15742 525 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 CD300LGQ6UXG3 332 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 ANO5Q75V66 913 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 PDZD4Q76G19 769 aaPredicted RBP12.34□□□□□ -0.43
GGA3-206ENST00000578773 RALGPS2Q86X27 583 aaPredicted RBP12.34□□□□□ -0.43
GGA3-206ENST00000578773 SHKBP1Q8TBC3 707 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 DDX27Q96GQ7 796 aaKnown RBP12.34□□□□□ -0.43
GGA3-206ENST00000578773 LZTS2Q9BRK4 669 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 TPSD1Q9BZJ3 242 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 TRPV4Q9HBA0 871 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 FBRSL1Q9HCM7 1045 aaKnown RBP12.34□□□□□ -0.43
GGA3-206ENST00000578773 SCUBE2Q9NQ36 999 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 CEP72Q9P209 647 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 GIT1Q9Y2X7 761 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 PTPRQQ9UMZ3 2332 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 ATXN2Q99700 1313 aaKnown RBP12.34□□□□□ -0.43
GGA3-206ENST00000578773 SPTA1P02549 2419 aa12.33□□□□□ -0.43
GGA3-206ENST00000578773 TSC2P49815 1807 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 DDX11L8A8MPP1 907 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 CHADO15335 359 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 RNF40O75150 1001 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 RHOBTB1O94844 696 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 NPTXRO95502 500 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 EGFP01133 1207 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 LRG1P02750 347 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 FGFR3P22607 806 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 MLLT6P55198 1093 aaPredicted RBP12.33□□□□□ -0.44
GGA3-206ENST00000578773 CACNB1Q02641 598 aaPredicted RBP12.33□□□□□ -0.44
GGA3-206ENST00000578773 FCHO2Q0JRZ9 810 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 LAMTOR4Q0VGL1 99 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 AP3B2Q13367 1082 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 AMHR2Q16671 573 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 CYP2U1Q7Z449 544 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 SRGAP1Q7Z6B7 1085 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 RALYLQ86SE5 291 aaKnown RBP12.33□□□□□ -0.44
GGA3-206ENST00000578773 PIGKQ92643 395 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 CSRNP2Q9H175 543 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 SLC32A1Q9H598 525 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 TMEM74BQ9NUR3 256 aa12.33□□□□□ -0.44
GGA3-206ENST00000578773 TEP1Q99973 2627 aaKnown RBP12.32□□□□□ -0.44
GGA3-206ENST00000578773 OTOL1A6NHN0 477 aaPredicted RBP12.32□□□□□ -0.44
GGA3-206ENST00000578773 SH2B2O14492 632 aaPredicted RBP12.32□□□□□ -0.44
GGA3-206ENST00000578773 ENGP17813 658 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 ARPP19P56211 112 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 CDC42EP1Q00587 391 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 SETQ01105 290 aaPredicted RBP12.32□□□□□ -0.44
GGA3-206ENST00000578773 TUSC3Q13454 348 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 SART3Q15020 963 aaKnown RBP12.32□□□□□ -0.44
GGA3-206ENST00000578773 TRIM61Q5EBN2 209 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 XKR3Q5GH77 459 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 CCNI2Q6ZMN8 369 aaPredicted RBP12.32□□□□□ -0.44
GGA3-206ENST00000578773 ARMCX6Q7L4S7 300 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 ZNF605Q86T29 641 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 TICAM2Q86XR7 235 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 YAF2Q8IY57 180 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 DAGLBQ8NCG7 672 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 CNNM3Q8NE01 707 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 NCOA7Q8NI08 942 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 EZH1Q92800 747 aaPredicted RBP12.32□□□□□ -0.44
GGA3-206ENST00000578773 MSANTD3Q96H12 275 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 UBL7Q96S82 380 aaPredicted RBP12.32□□□□□ -0.44
GGA3-206ENST00000578773 LRRC2Q9BYS8 371 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 LNPKQ9C0E8 428 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 PARP2Q9UGN5 583 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 INSL5Q9Y5Q6 135 aa12.32□□□□□ -0.44
GGA3-206ENST00000578773 PRRG1O14668 218 aa12.31□□□□□ -0.44
GGA3-206ENST00000578773 ARHGAP6O43182 974 aa12.31□□□□□ -0.44
GGA3-206ENST00000578773 ARF4P18085 180 aaPredicted RBP12.31□□□□□ -0.44
GGA3-206ENST00000578773 BRCC3P46736 316 aa12.31□□□□□ -0.44
GGA3-206ENST00000578773 DHPSP49366 369 aaPredicted RBP12.31□□□□□ -0.44
GGA3-206ENST00000578773 GNAQP50148 359 aa12.31□□□□□ -0.44
GGA3-206ENST00000578773 FUT2Q10981 343 aa12.31□□□□□ -0.44
GGA3-206ENST00000578773 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.31□□□□□ -0.44
GGA3-206ENST00000578773 NFXL1Q6ZNB6 911 aa12.31□□□□□ -0.44
GGA3-206ENST00000578773 SYNPOQ8N3V7 929 aa12.31□□□□□ -0.44
GGA3-206ENST00000578773 FRMD1Q8N878 549 aa12.31□□□□□ -0.44
GGA3-206ENST00000578773 RNF149Q8NC42 400 aa12.31□□□□□ -0.44
GGA3-206ENST00000578773 C3orf58Q8NDZ4 430 aa12.31□□□□□ -0.44
GGA3-206ENST00000578773 FAM200AQ8TCP9 573 aa12.31□□□□□ -0.44
GGA3-206ENST00000578773 SLITRK6Q9H5Y7 841 aa12.31□□□□□ -0.44
GGA3-206ENST00000578773 CYP4F11Q9HBI6 524 aa12.31□□□□□ -0.44
GGA3-206ENST00000578773 WRAP73Q9P2S5 460 aaPredicted RBP12.31□□□□□ -0.44
GGA3-206ENST00000578773 CCER2I3L3R5 266 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 J3QKU1 62 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 ATXN7O15265 892 aaPredicted RBP12.3□□□□□ -0.44
GGA3-206ENST00000578773 PRC1O43663 620 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 MICAL2O94851 1124 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 ERLIN2O94905 339 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 ABLIM3O94929 683 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 PRAMEF12O95522 483 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 SPIRE1Q08AE8 756 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 TMEM196Q5HYL7 178 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 PPP1R18Q6NYC8 613 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 NOTUMQ6P988 496 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 MIER3Q7Z3K6 550 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 MICU3Q86XE3 530 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms