RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 PDE11AQ9HCR9 933 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TBC1D13Q9NVG8 400 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 INTS13Q9NVM9 706 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 FANCLQ9NW38 375 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ITGA11Q9UKX5 1188 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PCDHA11Q9Y5I1 949 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 LRRIQ3A6PVS8 624 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PES1O00541 588 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 AFPP02771 609 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ALDH2P05091 517 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TPM3P06753 285 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 RPL9P32969 192 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ALDH7A1P49419 539 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 MXI1P50539 228 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 CLDN10P78369 228 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TRPC3Q13507 836 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TCP11X2Q5H9J9 407 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 CDKAL1Q5VV42 579 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 KRT39Q6A163 491 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TRIM59Q8IWR1 403 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 SAMD11Q96NU1 681 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 COLEC11Q9BWP8 271 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 IMPG2Q9BZV3 1241 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 RC3H2Q9HBD1 1191 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 SAMSN1Q9NSI8 373 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 RNF19AQ9NV58 838 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 STK39Q9UEW8 545 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PCDHB12Q9Y5F1 795 aa12.18□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PLXNA4Q9HCM2 1894 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ARHGEF37A1IGU5 675 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PTGESO14684 152 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 P4HA2O15460 535 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ZC3H11AO75152 810 aaKnown RBP eCLIP12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 NFICP08651 508 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 KRT19P08727 400 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 FOSL2P15408 326 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 COL9A1P20849 921 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PPM1AP35813 382 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PNPLA4P41247 253 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 OR1G1P47890 313 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 GATMP50440 423 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 RBP5P82980 135 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 MYO1EQ12965 1108 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 NCAPHQ15003 741 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TJAP1Q5JTD0 557 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TMCO2Q7Z6W1 182 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 LUZP1Q86V48 1076 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 EFCAB13Q8IY85 973 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 GSTCDQ8NEC7 633 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 MYLIPQ8WY64 445 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 BORCS6Q96GS4 357 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ZMAT2Q96NC0 199 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ZNF558Q96NG5 402 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TUBGCP2Q9BSJ2 902 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 MTMR12Q9C0I1 747 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 MMRN2Q9H8L6 949 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TMEM8AQ9HCN3 771 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 DPP3Q9NY33 737 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 FAN1Q9Y2M0 1017 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 MUC3AQ02505 3323 aa12.17□□□□□ -0.46
CDK5RAP3-210ENST00000578733 LRRC10BA6NIK2 292 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TNFRSF10AO00220 468 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TRAPPC3O43617 180 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 SERPINC1P01008 464 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TRIM49P0CI25 452 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TRIM49CP0CI26 452 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ZNF18P17022 549 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 LRPAP1P30533 357 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ATICP31939 592 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PIK3CAP42336 1068 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 KCNH2Q12809 1159 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ZBTB6Q15916 424 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 HSP90AA4PQ58FG1 418 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 FKBP15Q5T1M5 1219 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 LMBRD2Q68DH5 695 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 DCLRE1AQ6PJP8 1040 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TRAPPC11Q7Z392 1133 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 RNF214Q8ND24 703 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 SLC35C1Q96A29 364 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 POP1Q99575 1024 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 NRDE2Q9H7Z3 1164 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 MIOSQ9NXC5 875 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TUBGCP4Q9UGJ1 667 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 LIMA1Q9UHB6 759 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 NUB1Q9Y5A7 615 aa12.16□□□□□ -0.46
CDK5RAP3-210ENST00000578733 CDH23Q9H251 3354 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 CASTOR2A6NHX0 329 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PODXLO00592 558 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 CBFA2T2O43439 604 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ITGB3P05106 788 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 P4HA1P13674 534 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 GCLMP48507 274 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 FMO5P49326 533 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TAF6P49848 677 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 DLG4P78352 724 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 MYL7Q01449 175 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 DSC1Q08554 894 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ELAVL2Q12926 359 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 KRT31Q15323 416 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms