RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 DHX33Q9H6R0 707 aaKnown RBP7.98□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ZFP14Q9HCL3 533 aa7.98□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ZNF334Q9HCZ1 680 aaPredicted RBP7.98□□□□□ -1.13
CDK5RAP3-209ENST00000578663 C6orf50Q9HD87 102 aa7.98□□□□□ -1.13
CDK5RAP3-209ENST00000578663 HCFC1R1Q9NWW0 138 aa7.98□□□□□ -1.13
CDK5RAP3-209ENST00000578663 MIOSQ9NXC5 875 aa7.98□□□□□ -1.13
CDK5RAP3-209ENST00000578663 SNX14Q9Y5W7 946 aa7.98□□□□□ -1.13
CDK5RAP3-209ENST00000578663 V9GY48 417 aaPredicted RBP7.98□□□□□ -1.13
CDK5RAP3-209ENST00000578663 USP9YO00507 2555 aaPredicted RBP7.98□□□□□ -1.13
CDK5RAP3-209ENST00000578663 VWA8A3KMH1 1905 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 DNHD1Q96M86 4753 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ARHGEF37A1IGU5 675 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 TMEM150BA6NC51 233 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ZNF197O14709 1029 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 EPB41L2O43491 1005 aaKnown RBP7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 CHMP2AO43633 222 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 TSPAN1O60635 241 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 DKC1O60832 514 aaKnown RBP eCLIP7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 CEBPBP17676 345 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 PSMC3P17980 439 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 HOXC13P31276 330 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 RFC5P40937 340 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 RAP1GAPP47736 663 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 USP11P51784 963 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 PSMC5P62195 406 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 POU5F1BQ06416 359 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 SPIRE1Q08AE8 756 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 NCBP1Q09161 790 aaKnown RBP7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 LAMTOR4Q0VGL1 99 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 TUSC3Q13454 348 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ADCK5Q3MIX3 580 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 DGKKQ5KSL6 1271 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 FAM171A1Q5VUB5 890 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 CACNA2D4Q7Z3S7 1137 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 RAB11FIP4Q86YS3 637 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 SYNPOQ8N3V7 929 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 CHCHD4Q8N4Q1 142 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 DEFB124Q8NES8 71 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 TCP11Q8WWU5 503 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 GAB3Q8WWW8 586 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 PRPF31Q8WWY3 499 aaKnown RBP7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 MCRS1Q96EZ8 462 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ASB16Q96NS5 453 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 TRIM6Q9C030 488 aaPredicted RBP7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 RNF39Q9H2S5 420 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 NXF3Q9H4D5 531 aaKnown RBP7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 C8orf33Q9H7E9 229 aaPredicted RBP7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 TRPV4Q9HBA0 871 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 VPS45Q9NRW7 570 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 MTRRQ9UBK8 725 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 DAXXQ9UER7 740 aaPredicted RBP7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 LRBAP50851 2863 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 PI4KAP42356 2102 aa7.97□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ADAMTS9Q9P2N4 1935 aa7.96□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ENO4A6NNW6 628 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 DDX11L8A8MPP1 907 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 TMEM189-UBE2V1I3L0A0 370 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ARNTLO00327 626 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ADAM12O43184 909 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ZBTB43O43298 467 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 KIF4AO95239 1232 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 MPLP40238 635 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 PTENP60484 403 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CFHR1Q03591 330 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 GRM2Q14416 872 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 MXD4Q14582 209 aaPredicted RBP7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 AMHR2Q16671 573 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 Q4G0T1 1027 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 FAM78AQ5JUQ0 283 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 PRSS36Q5K4E3 855 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 RNF20Q5VTR2 975 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 DAB2IPQ5VWQ8 1189 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 FERMT3Q86UX7 667 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 RNF149Q8NC42 400 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 SMARCD2Q92925 531 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 E2F7Q96AV8 911 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ZC3H10Q96K80 434 aaKnown RBP7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 APOL6Q9BWW8 343 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 NFKBIZQ9BYH8 718 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 C22orf23Q9BZE7 217 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 HES2Q9Y543 173 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 BACE2Q9Y5Z0 518 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ZFHX3Q15911 3703 aa7.96□□□□□ -1.14
CDK5RAP3-209ENST00000578663 AHCTF1Q8WYP5 2266 aa7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 A0A087WV48 116 aa7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 SPAARA0A1B0GVQ0 90 aa7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 WDR27A2RRH5 827 aa7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ZNF263O14978 683 aa7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 EDIL3O43854 480 aa7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 EIF5BO60841 1220 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 RPP40O75818 363 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 SRGAP2CP0DJJ0 459 aa7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CPA1P15085 419 aa7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 PTPN2P17706 415 aa7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 FGFR3P22607 806 aa7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CCNE1P24864 410 aa7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 GDI1P31150 447 aa7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 OR1D2P34982 312 aa7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 QARSP47897 775 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-209ENST00000578663 TSGA10IPQ3SY00 556 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms