RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 TGS1Q96RS0 853 aaKnown RBP14.99□□□□□ -0.01
LINC01543-201ENST00000578367 CBX8Q9HC52 389 aa14.99□□□□□ -0.01
LINC01543-201ENST00000578367 TMEM8AQ9HCN3 771 aa14.99□□□□□ -0.01
LINC01543-201ENST00000578367 DPP3Q9NY33 737 aa14.99□□□□□ -0.01
LINC01543-201ENST00000578367 PLAGL2Q9UPG8 496 aa14.99□□□□□ -0.01
LINC01543-201ENST00000578367 FAN1Q9Y2M0 1017 aa14.99□□□□□ -0.01
LINC01543-201ENST00000578367 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.99□□□□□ -0.01
LINC01543-201ENST00000578367 MRPL42Q9Y6G3 142 aaKnown RBP14.99□□□□□ -0.01
LINC01543-201ENST00000578367 LINC01553A4QN01 128 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 GOLGA6L19H0YKK7 550 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 TRAPPC3O43617 180 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 DDHD2O94830 711 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 C4BPAP04003 597 aaKnown RBP14.98□□□□□ -0.01
LINC01543-201ENST00000578367 BMPR1AP36894 532 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 BCAR1P56945 870 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 RBP5P82980 135 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 PLCB3Q01970 1234 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 UBE3AQ05086 875 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 ELAVL2Q12926 359 aaKnown RBP14.98□□□□□ -0.01
LINC01543-201ENST00000578367 UPP1Q16831 310 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 ZACNQ401N2 412 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 GLRA4Q5JXX5 417 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 SPOUT1Q5T280 376 aaKnown RBP14.98□□□□□ -0.01
LINC01543-201ENST00000578367 FAM109BQ6ICB4 259 aaPredicted RBP14.98□□□□□ -0.01
LINC01543-201ENST00000578367 GPR153Q6NV75 609 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 KCNT2Q6UVM3 1135 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 C15orf39Q6ZRI6 1047 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 TRAPPC11Q7Z392 1133 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 ZNF280BQ86YH2 543 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 GPR65Q8IYL9 337 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 COLGALT1Q8NBJ5 622 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 PLEKHO2Q8TD55 490 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 TAF4BQ92750 862 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 EEF2KMTQ96G04 330 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 ZNF560Q96MR9 790 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 SLC28A3Q9HAS3 691 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 SAMSN1Q9NSI8 373 aaKnown RBP14.98□□□□□ -0.01
LINC01543-201ENST00000578367 FANCLQ9NW38 375 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 SPG21Q9NZD8 308 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 LZTS1Q9Y250 596 aa14.98□□□□□ -0.01
LINC01543-201ENST00000578367 KCNJ18B7U540 433 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 PODXLO00592 558 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 PIRO00625 290 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 NRP1O14786 923 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 ZC3H11AO75152 810 aaKnown RBP eCLIP14.97□□□□□ -0.01
LINC01543-201ENST00000578367 CA3P07451 260 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 FAM163BP0C2L3 166 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 LINC00271P0C7V0 271 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 DNAJB2P25686 324 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 MTIF2P46199 727 aaKnown RBP14.97□□□□□ -0.01
LINC01543-201ENST00000578367 MXI1P50539 228 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 RABGGTBP53611 331 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 SOX4Q06945 474 aaPredicted RBP14.97□□□□□ -0.01
LINC01543-201ENST00000578367 MYO1EQ12965 1108 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 KCNJ12Q14500 433 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 MAN2A1Q16706 1144 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 C1orf220Q5T0J3 134 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 TCERG1LQ5VWI1 586 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 C9orf57Q5W0N0 161 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 SV2AQ7L0J3 742 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 C1orf127Q8N9H9 656 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 TIFAQ96CG3 184 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 C11orf84Q9BUA3 381 aaPredicted RBP14.97□□□□□ -0.01
LINC01543-201ENST00000578367 FAM124BQ9H5Z6 455 aaPredicted RBP14.97□□□□□ -0.01
LINC01543-201ENST00000578367 VRTNQ9H8Y1 702 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 LIMA1Q9UHB6 759 aaKnown RBP14.97□□□□□ -0.01
LINC01543-201ENST00000578367 COQ4Q9Y3A0 265 aa14.97□□□□□ -0.01
LINC01543-201ENST00000578367 GTPBP10A4D1E9 387 aaKnown RBP14.96□□□□□ -0.01
LINC01543-201ENST00000578367 GRXCR1A8MXD5 290 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 AFPP02771 609 aaKnown RBP14.96□□□□□ -0.01
LINC01543-201ENST00000578367 CDK11BP21127 795 aaKnown RBP14.96□□□□□ -0.01
LINC01543-201ENST00000578367 OR1G1P47890 313 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 SLC11A1P49279 550 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 WNT7BP56706 349 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 TAP1Q03518 808 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 KRT17Q04695 432 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 KCNH2Q12809 1159 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 TRPC3Q13507 836 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 SLC39A11Q8N1S5 342 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 OR5B17Q8NGF7 314 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 CXorf38Q8TB03 319 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 SPATA18Q8TC71 538 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 ZNF516Q92618 1163 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 C18orf25Q96B23 403 aaPredicted RBP14.96□□□□□ -0.01
LINC01543-201ENST00000578367 IGSF21Q96ID5 467 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 TUBGCP2Q9BSJ2 902 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 IMPG2Q9BZV3 1241 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 MTMR12Q9C0I1 747 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 CXCL16Q9H2A7 254 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 TUBGCP4Q9UGJ1 667 aa14.96□□□□□ -0.01
LINC01543-201ENST00000578367 PUF60Q9UHX1 559 aaKnown RBP14.96□□□□□ -0.01
LINC01543-201ENST00000578367 YBX2Q9Y2T7 364 aaKnown RBP14.96□□□□□ -0.01
LINC01543-201ENST00000578367 LCHNA4D1U4 455 aa14.95□□□□□ -0.02
LINC01543-201ENST00000578367 PHACTR2O75167 634 aa14.95□□□□□ -0.02
LINC01543-201ENST00000578367 B3GAT3O94766 335 aa14.95□□□□□ -0.02
LINC01543-201ENST00000578367 FMO5P49326 533 aa14.95□□□□□ -0.02
LINC01543-201ENST00000578367 AARSP49588 968 aaKnown RBP eCLIP14.95□□□□□ -0.02
LINC01543-201ENST00000578367 TAF6P49848 677 aa14.95□□□□□ -0.02
LINC01543-201ENST00000578367 CLCNKBP51801 687 aa14.95□□□□□ -0.02
LINC01543-201ENST00000578367 DLG4P78352 724 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms