RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 POLR3FQ9H1D9 316 aaPredicted RBP12.22□□□□□ -0.45
GGA3-205ENST00000578348 CXorf56Q9H5V9 222 aa12.22□□□□□ -0.45
GGA3-205ENST00000578348 ZNF302Q9NR11 478 aa12.22□□□□□ -0.45
GGA3-205ENST00000578348 MAFBQ9Y5Q3 323 aaPredicted RBP12.22□□□□□ -0.45
GGA3-205ENST00000578348 MYH9P35579 1960 aaKnown RBP12.21□□□□□ -0.45
GGA3-205ENST00000578348 SPDYE5A6NIY4 337 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 CHUKO15111 745 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 SPOPO43791 374 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 OATP04181 439 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 KCNJ1P48048 391 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 ADCY2Q08462 1091 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 MKRN4PQ13434 485 aaPredicted RBP12.21□□□□□ -0.45
GGA3-205ENST00000578348 SNRNP35Q16560 246 aaKnown RBP12.21□□□□□ -0.45
GGA3-205ENST00000578348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.21□□□□□ -0.45
GGA3-205ENST00000578348 CYFIP1Q7L576 1253 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 NOP9Q86U38 636 aaKnown RBP12.21□□□□□ -0.45
GGA3-205ENST00000578348 CCDC25Q86WR0 208 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 CCDC197Q8NCU1 140 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 EPS8L1Q8TE68 723 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 KCNN1Q92952 543 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 FBXL18Q96ME1 805 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 RPS6KC1Q96S38 1066 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 INTS9Q9NV88 658 aaKnown RBP12.21□□□□□ -0.45
GGA3-205ENST00000578348 ARHGAP28Q9P2N2 729 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 PARP2Q9UGN5 583 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 TRPC6Q9Y210 931 aa12.21□□□□□ -0.45
GGA3-205ENST00000578348 IGKV6D-21A0A0A0MT36 114 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 GOLGA8IPA6NC78 632 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 SOWAHBA6NEL2 793 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 GOLGA8JA6NMD2 632 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 RIPK2O43353 540 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 SLC25A27O95847 323 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 GARTP22102 1010 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 RDXP35241 583 aaKnown RBP12.21□□□□□ -0.46
GGA3-205ENST00000578348 EMC2Q15006 297 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 MTERF2Q49AM1 385 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 LACTB2Q53H82 288 aaPredicted RBP12.21□□□□□ -0.46
GGA3-205ENST00000578348 C6orf118Q5T5N4 469 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 SEPT14Q6ZU15 432 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 USP37Q86T82 979 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 SLC47A2Q86VL8 602 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 NCAPG2Q86XI2 1143 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 CBWD2Q8IUF1 395 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 PARP9Q8IXQ6 854 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 PPM1KQ8N3J5 372 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 ANKS4BQ8N8V4 417 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 CDCA5Q96FF9 252 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 TMEM117Q9H0C3 514 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 ASCC2Q9H1I8 757 aaPredicted RBP12.21□□□□□ -0.46
GGA3-205ENST00000578348 WNT8AQ9H1J5 351 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 DONSONQ9NYP3 566 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 AGTPBP1Q9UPW5 1226 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 KCNH4Q9UQ05 1017 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 PCDHA3Q9Y5H8 950 aa12.21□□□□□ -0.46
GGA3-205ENST00000578348 ADGRA3Q8IWK6 1321 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 CYP26A1O43174 497 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 SORBS3O60504 671 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 GGPS1O95749 300 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 AGTP01019 485 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 CHRNB2P17787 502 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 UBA1P22314 1058 aaKnown RBP12.2□□□□□ -0.46
GGA3-205ENST00000578348 GBP1P32455 592 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 GTF2H1P32780 548 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 MAP2K2P36507 400 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 COILP38432 576 aaPredicted RBP12.2□□□□□ -0.46
GGA3-205ENST00000578348 IFNAR2P48551 515 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 POLGP54098 1239 aaPredicted RBP12.2□□□□□ -0.46
GGA3-205ENST00000578348 SOX10P56693 466 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 FSTL1Q12841 308 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 PPIL2Q13356 520 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 CCDC38Q502W7 563 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 BRDTQ58F21 947 aaPredicted RBP12.2□□□□□ -0.46
GGA3-205ENST00000578348 SLC39A4Q6P5W5 647 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 USP50Q70EL3 339 aaPredicted RBP12.2□□□□□ -0.46
GGA3-205ENST00000578348 LRRC34Q8IZ02 419 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 ZNF564Q8TBZ8 553 aaPredicted RBP12.2□□□□□ -0.46
GGA3-205ENST00000578348 SAAL1Q96ER3 474 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 MFSD14AQ96MC6 490 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 TACO1Q9BSH4 297 aaKnown RBP12.2□□□□□ -0.46
GGA3-205ENST00000578348 NUP85Q9BW27 656 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 KDM4CQ9H3R0 1056 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 NOCTQ9UK39 431 aaKnown RBP12.2□□□□□ -0.46
GGA3-205ENST00000578348 MTUS1Q9ULD2 1270 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 SIP14410 1827 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 RASGRF2O14827 1237 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 CNMDO75829 334 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 VIMP08670 466 aaKnown RBP12.2□□□□□ -0.46
GGA3-205ENST00000578348 RARAP10276 462 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 ATP4AP20648 1035 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 NEDD9Q14511 834 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 SLMAPQ14BN4 828 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 SNCBQ16143 134 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 C9orf131Q5VYM1 1079 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 SLC13A5Q86YT5 568 aaPredicted RBP12.2□□□□□ -0.46
GGA3-205ENST00000578348 GPD1LQ8N335 351 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 PARD3BQ8TEW8 1205 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 ZC3H15Q8WU90 426 aaKnown RBP12.2□□□□□ -0.46
GGA3-205ENST00000578348 POMGNT1Q8WZA1 660 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 P3H4Q92791 437 aa12.2□□□□□ -0.46
GGA3-205ENST00000578348 CD101Q93033 1021 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms