RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 MEIS3P2A8K0S8 358 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 N4BP1O75113 896 aaKnown RBP4.48□□□□□ -1.69
PTPRM-206ENST00000578093 GPR32O75388 356 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 DDAH1O94760 285 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 USP17L7P0C7H9 530 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 EPHA1P21709 976 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 RBM25P49756 843 aaKnown RBP4.48□□□□□ -1.69
PTPRM-206ENST00000578093 METAP2P50579 478 aaKnown RBP eCLIP4.48□□□□□ -1.69
PTPRM-206ENST00000578093 STAT5BP51692 787 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 CLCN3P51790 818 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 PPP2R3AQ06190 1150 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 PCDH1Q08174 1060 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 TRAF1Q13077 416 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 ANGPT1Q15389 498 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 WWC2Q6AWC2 1192 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 ABHD15Q6UXT9 468 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 TMTC3Q6ZXV5 915 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 SLC24A5Q71RS6 500 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 PLPPR4Q7Z2D5 763 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 TRMT1LQ7Z2T5 733 aaKnown RBP4.48□□□□□ -1.69
PTPRM-206ENST00000578093 HEATR3Q7Z4Q2 680 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 CATIPQ7Z7H3 387 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 RALYLQ86SE5 291 aaKnown RBP4.48□□□□□ -1.69
PTPRM-206ENST00000578093 CCDC105Q8IYK2 499 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 UBALD2Q8IYN6 164 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 LRRC43Q8N309 656 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 LRRC71Q8N4P6 559 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 LINC01465Q8N7H1 131 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 TDRD5Q8NAT2 981 aaKnown RBP4.48□□□□□ -1.69
PTPRM-206ENST00000578093 RNF169Q8NCN4 708 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 NCOA7Q8NI08 942 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 CTCFLQ8NI51 663 aaPredicted RBP4.48□□□□□ -1.69
PTPRM-206ENST00000578093 CASP10Q92851 521 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 NKD2Q969F2 451 aaPredicted RBP4.48□□□□□ -1.69
PTPRM-206ENST00000578093 RMDN1Q96DB5 314 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 MRRFQ96E11 262 aaKnown RBP4.48□□□□□ -1.69
PTPRM-206ENST00000578093 CDHR1Q96JP9 859 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 ZNF558Q96NG5 402 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 MXRA8Q9BRK3 442 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 LRRC2Q9BYS8 371 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 ANO3Q9BYT9 981 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 CEP44Q9C0F1 390 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 TMEM117Q9H0C3 514 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 ZBP1Q9H171 429 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 ADAM7Q9H2U9 754 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 AZI2Q9H6S1 392 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 PSTPIP2Q9H939 334 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 ATP6V0A4Q9HBG4 840 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 OSGEPQ9NPF4 335 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 C1orf112Q9NSG2 853 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 SEC63Q9UGP8 760 aaKnown RBP4.48□□□□□ -1.69
PTPRM-206ENST00000578093 GPN3Q9UHW5 284 aaPredicted RBP4.48□□□□□ -1.69
PTPRM-206ENST00000578093 LZTS1Q9Y250 596 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 NR2E1Q9Y466 385 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 R4GN57 208 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 COL1A2P08123 1366 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 USP24Q9UPU5 2620 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 SPEGQ15772 3267 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 CACNA1IQ9P0X4 2223 aa4.48□□□□□ -1.69
PTPRM-206ENST00000578093 TPRP12270 2363 aaKnown RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 COL4A2P08572 1712 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 CHD8Q9HCK8 2581 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 VWA8A3KMH1 1905 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 FSD2A1L4K1 749 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 FAM86B1E9PN63 330 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 HIP1O00291 1037 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 DHX15O43143 795 aaKnown RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 SGSM2O43147 1006 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 PRC1O43663 620 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 HBP1O60381 514 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 CSDE1O75534 798 aaKnown RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 KRT37O76014 449 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 EOMESO95936 686 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 RPLP2P05387 115 aaKnown RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 FAM86B2P0C5J1 330 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 SRGAP2BP0DMP2 458 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 ESRRAP11474 423 aaPredicted RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 HOXB8P17481 243 aaPredicted RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 AOC1P19801 751 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 VAMP1P23763 118 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 CHMLP26374 656 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 CDC25BP30305 580 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 CA8P35219 290 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 SREBF1P36956 1147 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 CLCN5P51795 746 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 CRYBB1P53674 252 aaPredicted RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 BCAR1P56945 870 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 FAM189BP81408 668 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 C19orf57Q0VDD7 668 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 TRDNQ13061 729 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 DRP2Q13474 957 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 SMC1AQ14683 1233 aaKnown RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 UGCGQ16739 394 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 LONRF3Q496Y0 759 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 TTC22Q5TAA0 569 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 MCTP2Q6DN12 878 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 TMC5Q6UXY8 1006 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 ERMP1Q7Z2K6 904 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 VN1R5Q7Z5H4 357 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms