RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 C9orf72Q96LT7 481 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 PCSK1NQ9UHG2 260 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 CNOT7Q9UIV1 285 aaKnown RBP11.29□□□□□ -0.6
SEC22B-201ENST00000578049 COILP38432 576 aaPredicted RBP11.29□□□□□ -0.6
SEC22B-201ENST00000578049 KRR1Q13601 381 aaKnown RBP11.29□□□□□ -0.6
SEC22B-201ENST00000578049 SLC29A2Q14542 456 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 SLC13A5Q86YT5 568 aaPredicted RBP11.29□□□□□ -0.6
SEC22B-201ENST00000578049 PASD1Q8IV76 773 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 ADGRF4Q8IZF3 695 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 IRAK4Q9NWZ3 460 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 DLGAP2Q9P1A6 1054 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 WHRNQ9P202 907 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 NARFQ9UHQ1 456 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 CYP26A1O43174 497 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 FKBP6O75344 327 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 ATP5BP06576 529 aaKnown RBP11.29□□□□□ -0.6
SEC22B-201ENST00000578049 FASTKD1Q53R41 847 aaKnown RBP11.29□□□□□ -0.6
SEC22B-201ENST00000578049 SPOUT1Q5T280 376 aaKnown RBP11.29□□□□□ -0.6
SEC22B-201ENST00000578049 THEM5Q8N1Q8 247 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 ASAP3Q8TDY4 903 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 E2F7Q96AV8 911 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 NAT9Q9BTE0 207 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 MANSC1Q9H8J5 431 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 CCDC195A0A1B0GUA6 201 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 ENO4A6NNW6 628 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 PYGLP06737 847 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 CALML6Q8TD86 181 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 TEKT4Q8WW24 435 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 USP6NLQ92738 828 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 GID8Q9NWU2 228 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 KIF17Q9P2E2 1029 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 CDC42BPBQ9Y5S2 1711 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 F5H6K3 240 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 GUCY1A2P33402 732 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 SCTRP47872 440 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 KLRC3Q07444 240 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 STX5Q13190 355 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 PTK7Q13308 1070 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 PTPAQ15257 358 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 SLC10A5Q5PT55 438 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 PPIL6Q8IXY8 311 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 TNIP3Q96KP6 325 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 NLRP4Q96MN2 994 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 GGA2Q9UJY4 613 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 GLI2P10070 1586 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 KANSL1LA0AUZ9 987 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 MYMKA6NI61 221 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 ADCY3O60266 1144 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 DNAJC6O75061 913 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 S100A5P33763 92 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 TMED10P49755 219 aaKnown RBP11.28□□□□□ -0.6
SEC22B-201ENST00000578049 TTC39BQ5VTQ0 682 aaPredicted RBP11.28□□□□□ -0.6
SEC22B-201ENST00000578049 KCNV1Q6PIU1 500 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 EPAS1Q99814 870 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 HSPBP1Q9NZL4 362 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 NAGPAQ9UK23 515 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 GZMAP12544 262 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 RPA1P27694 616 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 HSD17B4P51659 736 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 GEMIN4P57678 1058 aaKnown RBP11.28□□□□□ -0.6
SEC22B-201ENST00000578049 PRKG1Q13976 671 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 ZNF394Q53GI3 561 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 CDKAL1Q5VV42 579 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 TPCN2Q8NHX9 752 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 DTX3LQ8TDB6 740 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 SNX19Q92543 992 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 IFT43Q96FT9 208 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 THTPAQ9BU02 230 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 TMEM260Q9NX78 707 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 ALDH18A1P54886 795 aaKnown RBP11.28□□□□□ -0.6
SEC22B-201ENST00000578049 ANTXR2P58335 489 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 MRPS15P82914 257 aaKnown RBP11.28□□□□□ -0.6
SEC22B-201ENST00000578049 CDC42EP1Q00587 391 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 POU5F1BQ06416 359 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 RWDD4Q6NW29 188 aaKnown RBP11.28□□□□□ -0.6
SEC22B-201ENST00000578049 PATL1Q86TB9 770 aaKnown RBP11.28□□□□□ -0.6
SEC22B-201ENST00000578049 CDR2LQ86X02 465 aaPredicted RBP11.28□□□□□ -0.6
SEC22B-201ENST00000578049 FBXL16Q8N461 479 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 FAR2Q96K12 515 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 ZSWIM1Q9BR11 485 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 ZNF302Q9NR11 478 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 H2AFYO75367 372 aaKnown RBP11.28□□□□□ -0.6
SEC22B-201ENST00000578049 DSG1Q02413 1049 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 CAPRIN1Q14444 709 aaKnown RBP11.28□□□□□ -0.6
SEC22B-201ENST00000578049 DHX35Q9H5Z1 703 aaKnown RBP11.28□□□□□ -0.6
SEC22B-201ENST00000578049 ZNF229Q9UJW7 825 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 MADDQ8WXG6 1647 aa11.28□□□□□ -0.6
SEC22B-201ENST00000578049 PSTPIP1O43586 416 aa11.27□□□□□ -0.6
SEC22B-201ENST00000578049 GNAT1P11488 350 aa11.27□□□□□ -0.6
SEC22B-201ENST00000578049 COMTP21964 271 aa11.27□□□□□ -0.6
SEC22B-201ENST00000578049 COPAP53621 1224 aa11.27□□□□□ -0.6
SEC22B-201ENST00000578049 OSTNP61366 133 aa11.27□□□□□ -0.6
SEC22B-201ENST00000578049 CYTH1Q15438 398 aa11.27□□□□□ -0.6
SEC22B-201ENST00000578049 SLC44A4Q53GD3 710 aa11.27□□□□□ -0.6
SEC22B-201ENST00000578049 RTKN2Q8IZC4 609 aa11.27□□□□□ -0.6
SEC22B-201ENST00000578049 TMEM8AQ9HCN3 771 aa11.27□□□□□ -0.6
SEC22B-201ENST00000578049 SLC24A2Q9UI40 661 aa11.27□□□□□ -0.6
SEC22B-201ENST00000578049 C3orf70A6NLC5 250 aaPredicted RBP11.27□□□□□ -0.61
SEC22B-201ENST00000578049 SRP72O76094 671 aaKnown RBP11.27□□□□□ -0.61
SEC22B-201ENST00000578049 ZNF543Q08ER8 600 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms