RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 HNRNPH3P31942 346 aaKnown RBP13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 GEMIN4P57678 1058 aaKnown RBP13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 KLRC3Q07444 240 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 MTM1Q13496 603 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 ARID3BQ8IVW6 561 aaPredicted RBP13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 RNPEPL1Q9HAU8 725 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 ASNSD1Q9NWL6 643 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 NDUFA13Q9P0J0 144 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 TRPC5Q9UL62 973 aaPredicted RBP13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 UBE4BO95155 1302 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 RNF103-CHMP3A0A140T963 221 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 AKAP3O75969 853 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 GH2P01242 217 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 KPNA2P52292 529 aaKnown RBP13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 EIF3EP60228 445 aaKnown RBP13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 QPCTQ16769 361 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 CHMP2BQ9UQN3 213 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 SPATA31A3Q5VYP0 1347 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 TTC36A6NLP5 189 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 FAM196BA6NMK8 535 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 KLRC4O43908 158 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 XRCC4Q13426 336 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 INPP4AQ96PE3 977 aaPredicted RBP13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 MRPL40Q9NQ50 206 aaKnown RBP13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 INO80B-WBP1J3KQ70 363 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 KLHL2O95198 593 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 EPHB2P29323 1055 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 TYK2P29597 1187 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 TRADDQ15628 312 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 TEDDM1Q5T9Z0 273 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 IRF2BP1Q8IU81 584 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 MCPH1Q8NEM0 835 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 INO80BQ9C086 356 aaPredicted RBP13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 P4HA2O15460 535 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 AP1B1Q10567 949 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 PRPSAP1Q14558 356 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 CLEC10AQ8IUN9 316 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 THAP11Q96EK4 314 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 UBXN6Q9BZV1 441 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 SLC38A10Q9HBR0 1119 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 METTL5Q9NRN9 209 aaKnown RBP13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 SHBGP04278 402 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 STMN1P16949 149 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 PSMC1P62191 440 aaKnown RBP13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 OCRLQ01968 901 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 IRGCQ6NXR0 463 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 B4GALNT2Q8NHY0 566 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 E2F7Q96AV8 911 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 HEXIM2Q96MH2 286 aaKnown RBP13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 ZMAT2Q96NC0 199 aaKnown RBP13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 SENP7Q9BQF6 1050 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 ETAA1Q9NY74 926 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 DDX3XO00571 662 aaKnown RBP eCLIP13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 AP1G2O75843 785 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 FGFR2P21802 821 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 BCAR1P56945 870 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 OCA2Q04671 838 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 SURF1Q15526 300 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 FAM160B2Q86V87 743 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 LCA5Q86VQ0 697 aa13.82□□□□□ -0.2
PCDHGB3-201ENST00000576222 CACNB3P54284 484 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 OSTNP61366 133 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 CNGA2Q16280 664 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 JMJD4Q9H9V9 463 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 AGPAT3Q9NRZ7 376 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 IL1RAPL1Q9NZN1 696 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 WARS2Q9UGM6 360 aaKnown RBP13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 XPO7Q9UIA9 1087 aaKnown RBP13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 WEE2P0C1S8 567 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 ATP6V1B1P15313 513 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 ATP4AP20648 1035 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 RFC5P40937 340 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 JAK3P52333 1124 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 BTKQ06187 659 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 MTMR1Q13613 665 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 CEP55Q53EZ4 464 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 CC2D2BQ6DHV5 1058 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 IZUMO2Q6UXV1 221 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 C16orf86Q6ZW13 317 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 SCUBE1Q8IWY4 988 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 GPD1LQ8N335 351 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 BAP1Q92560 729 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 FAM111AQ96PZ2 611 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 MYLK2Q9H1R3 596 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 KIDINS220Q9ULH0 1771 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 TECPR2O15040 1411 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 MYO3BQ8WXR4 1341 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 RSPH10B2B2RC85 870 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 GNGT2O14610 69 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 MGEA5O60502 916 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 PSAPP07602 524 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 SNRPAP09012 282 aaKnown RBP13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 RSPH10BP0C881 870 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 TMEM259Q4ZIN3 620 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 EPC2Q52LR7 807 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 SYCP2LQ5T4T6 812 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 LMBRD2Q68DH5 695 aaPredicted RBP13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 ARHGAP22Q7Z5H3 698 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 SNRNP27Q8WVK2 155 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms