RNA–Protein interactions for RNA: ENST00000575707.5

TRAP1-213, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-213ENST00000575707 SLC8B1Q6J4K2 584 aa18.06■□□□□ 0.48
TRAP1-213ENST00000575707 BRAPQ7Z569 592 aa18.06■□□□□ 0.48
TRAP1-213ENST00000575707 C18orf25Q96B23 403 aaPredicted RBP18.06■□□□□ 0.48
TRAP1-213ENST00000575707 CALML4Q96GE6 196 aa18.06■□□□□ 0.48
TRAP1-213ENST00000575707 POLIQ9UNA4 740 aa18.06■□□□□ 0.48
TRAP1-213ENST00000575707 NUMBLQ9Y6R0 609 aa18.06■□□□□ 0.48
TRAP1-213ENST00000575707 NOTCH4Q99466 2003 aa18.06■□□□□ 0.48
TRAP1-213ENST00000575707 MYO15AQ9UKN7 3530 aa18.05■□□□□ 0.48
TRAP1-213ENST00000575707 NPHP3-ACAD11A0A0J9YXS1 232 aa18.05■□□□□ 0.48
TRAP1-213ENST00000575707 KRBA1A5PL33 1030 aa18.05■□□□□ 0.48
TRAP1-213ENST00000575707 PROB1E7EW31 1015 aa18.05■□□□□ 0.48
TRAP1-213ENST00000575707 CLDN3O15551 220 aa18.05■□□□□ 0.48
TRAP1-213ENST00000575707 PI15O43692 258 aa18.05■□□□□ 0.48
TRAP1-213ENST00000575707 SCP2P22307 547 aa18.05■□□□□ 0.48
TRAP1-213ENST00000575707 UBA7P41226 1012 aa18.05■□□□□ 0.48
TRAP1-213ENST00000575707 CACNB1Q02641 598 aaPredicted RBP18.05■□□□□ 0.48
TRAP1-213ENST00000575707 VARS2Q5ST30 1063 aaKnown RBP18.05■□□□□ 0.48
TRAP1-213ENST00000575707 ZNF461Q8TAF7 563 aa18.05■□□□□ 0.48
TRAP1-213ENST00000575707 SLC2A4RGQ9NR83 387 aa18.05■□□□□ 0.48
TRAP1-213ENST00000575707 MYH15Q9Y2K3 1946 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 H7C4K7 107 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 TBC1D4O60343 1298 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 ABLIM3O94929 683 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 LONP1P36776 959 aaKnown RBP18.04■□□□□ 0.48
TRAP1-213ENST00000575707 ROR1Q01973 937 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 MRPL58Q14197 206 aaKnown RBP18.04■□□□□ 0.48
TRAP1-213ENST00000575707 MTSS1LQ765P7 747 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 HAUS6Q7Z4H7 955 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 CCDC105Q8IYK2 499 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 GPR152Q8TDT2 470 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 LRRC15Q8TF66 581 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 FGF13Q92913 245 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 FGF14Q92915 247 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 SUSD3Q96L08 255 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 REEP2Q9BRK0 252 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 HAPLN2Q9GZV7 340 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 PLEKHA5Q9HAU0 1116 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 DNMT3BQ9UBC3 853 aaKnown RBP18.04■□□□□ 0.48
TRAP1-213ENST00000575707 KCNH3Q9ULD8 1083 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 NUB1Q9Y5A7 615 aa18.04■□□□□ 0.48
TRAP1-213ENST00000575707 ARHGEF37A1IGU5 675 aa18.03■□□□□ 0.48
TRAP1-213ENST00000575707 WDR27A2RRH5 827 aa18.03■□□□□ 0.48
TRAP1-213ENST00000575707 CLTAP09496 248 aa18.03■□□□□ 0.48
TRAP1-213ENST00000575707 ZNF131P52739 623 aa18.03■□□□□ 0.48
TRAP1-213ENST00000575707 KYAT1Q16773 422 aa18.03■□□□□ 0.48
TRAP1-213ENST00000575707 PABPC1LQ4VXU2 614 aaKnown RBP18.03■□□□□ 0.48
TRAP1-213ENST00000575707 SEZ6Q53EL9 994 aa18.03■□□□□ 0.48
TRAP1-213ENST00000575707 PARM1Q6UWI2 310 aa18.03■□□□□ 0.48
TRAP1-213ENST00000575707 GPBP1Q86WP2 473 aa18.03■□□□□ 0.48
TRAP1-213ENST00000575707 ITFG1Q8TB96 612 aa18.03■□□□□ 0.48
TRAP1-213ENST00000575707 BICD1Q96G01 975 aa18.03■□□□□ 0.48
TRAP1-213ENST00000575707 BLOC1S4Q9NUP1 217 aa18.03■□□□□ 0.48
TRAP1-213ENST00000575707 HCFC1R1Q9NWW0 138 aa18.03■□□□□ 0.48
TRAP1-213ENST00000575707 CA14Q9ULX7 337 aa18.03■□□□□ 0.48
TRAP1-213ENST00000575707 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.03■□□□□ 0.48
TRAP1-213ENST00000575707 ZFHX2Q9C0A1 2572 aaPredicted RBP18.03■□□□□ 0.48
TRAP1-213ENST00000575707 DMDP11532 3685 aa18.03■□□□□ 0.48
TRAP1-213ENST00000575707 TTC26A0AVF1 554 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 GFRA3O60609 400 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 PIGRP01833 764 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 CXCL8P10145 99 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 ATF2P15336 505 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 PLCG1P19174 1290 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 NBL1P41271 181 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 MATR3P43243 847 aaKnown RBP eCLIP18.02■□□□□ 0.48
TRAP1-213ENST00000575707 GRIN1Q05586 938 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 CUL4AQ13619 759 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 SF3A1Q15459 793 aaKnown RBP18.02■□□□□ 0.48
TRAP1-213ENST00000575707 PHLDB3Q6NSJ2 640 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 DTWD2Q8NBA8 298 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 RPP25Q9BUL9 199 aaKnown RBP18.02■□□□□ 0.48
TRAP1-213ENST00000575707 TBC1D17Q9HA65 648 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 PARVGQ9HBI0 331 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 AVENQ9NQS1 362 aaPredicted RBP18.02■□□□□ 0.48
TRAP1-213ENST00000575707 ARHGEF3Q9NR81 526 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 TUBGCP4Q9UGJ1 667 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 TBX20Q9UMR3 447 aa18.02■□□□□ 0.48
TRAP1-213ENST00000575707 HNRNPDLO14979 420 aaKnown RBP18.01■□□□□ 0.47
TRAP1-213ENST00000575707 FAM13AO94988 1023 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 CYP3A5P20815 502 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 RFX1P22670 979 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 LRPAP1P30533 357 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 ELF1P32519 619 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 MCM4P33991 863 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 LIG4P49917 911 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 KARSQ15046 597 aaKnown RBP18.01■□□□□ 0.47
TRAP1-213ENST00000575707 TPGS2Q68CL5 300 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 ZNF280DQ6N043 979 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 NPAS3Q8IXF0 933 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 TCEAL8Q8IYN2 117 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 MYCT1Q8N699 235 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 APPL2Q8NEU8 664 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 ST13P5Q8NFI4 369 aaPredicted RBP18.01■□□□□ 0.47
TRAP1-213ENST00000575707 RAD54LQ92698 747 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 FBXL5Q9UKA1 691 aa18.01■□□□□ 0.47
TRAP1-213ENST00000575707 K7ENM7 598 aa18■□□□□ 0.47
TRAP1-213ENST00000575707 STK25O00506 426 aa18■□□□□ 0.47
TRAP1-213ENST00000575707 TRAK2O60296 914 aa18■□□□□ 0.47
TRAP1-213ENST00000575707 FAM189A1O60320 539 aa18■□□□□ 0.47
TRAP1-213ENST00000575707 LRG1P02750 347 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms