RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 METTL14Q9HCE5 456 aaKnown RBP17.01■□□□□ 0.31
CCNE1-204ENST00000574121 INTS13Q9NVM9 706 aa17.01■□□□□ 0.31
CCNE1-204ENST00000574121 TUBGCP4Q9UGJ1 667 aa17.01■□□□□ 0.31
CCNE1-204ENST00000574121 PUF60Q9UHX1 559 aaKnown RBP17.01■□□□□ 0.31
CCNE1-204ENST00000574121 ITGB1P05556 798 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 TMEM191BP0C7N4 346 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 DLATP10515 647 aaKnown RBP17■□□□□ 0.31
CCNE1-204ENST00000574121 TNNI1P19237 187 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 PBX3P40426 434 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 VAMP7P51809 220 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 STX17P56962 302 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 TFAMQ00059 246 aaKnown RBP17■□□□□ 0.31
CCNE1-204ENST00000574121 ELAVL2Q12926 359 aaKnown RBP17■□□□□ 0.31
CCNE1-204ENST00000574121 BFSP1Q12934 665 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 GPM6BQ13491 265 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 CCDC127Q96BQ5 260 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 BORCS6Q96GS4 357 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 PAAF1Q9BRP4 392 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 GZF1Q9H116 711 aaPredicted RBP17■□□□□ 0.31
CCNE1-204ENST00000574121 GOLGA2P5Q9HBQ8 144 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 DPP3Q9NY33 737 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 ADAM28Q9UKQ2 775 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 ITGA11Q9UKX5 1188 aa17■□□□□ 0.31
CCNE1-204ENST00000574121 PRG3Q9Y2Y8 225 aaPredicted RBP17■□□□□ 0.31
CCNE1-204ENST00000574121 ANO9A1A5B4 782 aa16.99■□□□□ 0.31
CCNE1-204ENST00000574121 NT5C1B-RDH14C9J2C7 533 aa16.99■□□□□ 0.31
CCNE1-204ENST00000574121 PODXLO00592 558 aa16.99■□□□□ 0.31
CCNE1-204ENST00000574121 TRAPPC3O43617 180 aa16.99■□□□□ 0.31
CCNE1-204ENST00000574121 B3GAT3O94766 335 aa16.99■□□□□ 0.31
CCNE1-204ENST00000574121 KIF4AO95239 1232 aa16.99■□□□□ 0.31
CCNE1-204ENST00000574121 TNNC2P02585 160 aa16.99■□□□□ 0.31
CCNE1-204ENST00000574121 CLCNKBP51801 687 aa16.99■□□□□ 0.31
CCNE1-204ENST00000574121 MARSP56192 900 aaKnown RBP16.99■□□□□ 0.31
CCNE1-204ENST00000574121 PDE12Q6L8Q7 609 aaKnown RBP16.99■□□□□ 0.31
CCNE1-204ENST00000574121 FRMD5Q7Z6J6 570 aa16.99■□□□□ 0.31
CCNE1-204ENST00000574121 DDX53Q86TM3 631 aaKnown RBP16.99■□□□□ 0.31
CCNE1-204ENST00000574121 TMEM173Q86WV6 379 aaPredicted RBP16.99■□□□□ 0.31
CCNE1-204ENST00000574121 EEF2KMTQ96G04 330 aa16.99■□□□□ 0.31
CCNE1-204ENST00000574121 MED15Q96RN5 788 aa16.99■□□□□ 0.31
CCNE1-204ENST00000574121 SRRTQ9BXP5 876 aaKnown RBP16.99■□□□□ 0.31
CCNE1-204ENST00000574121 NAT10Q9H0A0 1025 aaKnown RBP16.99■□□□□ 0.31
CCNE1-204ENST00000574121 CERS4Q9HA82 394 aa16.99■□□□□ 0.31
CCNE1-204ENST00000574121 MARCH5Q9NX47 278 aa16.99■□□□□ 0.31
CCNE1-204ENST00000574121 LMCD1Q9NZU5 365 aa16.99■□□□□ 0.31
CCNE1-204ENST00000574121 ARMCX3Q9UH62 379 aaPredicted RBP16.99■□□□□ 0.31
CCNE1-204ENST00000574121 TDRD15B5MCY1 1934 aaKnown RBP16.99■□□□□ 0.31
CCNE1-204ENST00000574121 SF3B1O75533 1304 aaKnown RBP eCLIP16.98■□□□□ 0.31
CCNE1-204ENST00000574121 LRRIQ3A6PVS8 624 aaPredicted RBP16.98■□□□□ 0.31
CCNE1-204ENST00000574121 STX10O60499 249 aa16.98■□□□□ 0.31
CCNE1-204ENST00000574121 TADA2AO75478 443 aa16.98■□□□□ 0.31
CCNE1-204ENST00000574121 EFEMP2O95967 443 aa16.98■□□□□ 0.31
CCNE1-204ENST00000574121 GTF2H1P32780 548 aa16.98■□□□□ 0.31
CCNE1-204ENST00000574121 PNPLA4P41247 253 aa16.98■□□□□ 0.31
CCNE1-204ENST00000574121 GRIN2CQ14957 1233 aa16.98■□□□□ 0.31
CCNE1-204ENST00000574121 PTPROQ16827 1216 aa16.98■□□□□ 0.31
CCNE1-204ENST00000574121 TPD52L1Q16890 204 aaPredicted RBP16.98■□□□□ 0.31
CCNE1-204ENST00000574121 C9orf57Q5W0N0 161 aa16.98■□□□□ 0.31
CCNE1-204ENST00000574121 RNF168Q8IYW5 571 aaPredicted RBP16.98■□□□□ 0.31
CCNE1-204ENST00000574121 C1orf127Q8N9H9 656 aa16.98■□□□□ 0.31
CCNE1-204ENST00000574121 ENOX1Q8TC92 643 aaKnown RBP16.98■□□□□ 0.31
CCNE1-204ENST00000574121 SPPL3Q8TCT6 385 aa16.98■□□□□ 0.31
CCNE1-204ENST00000574121 PLEKHO2Q8TD55 490 aa16.98■□□□□ 0.31
CCNE1-204ENST00000574121 BCL7CQ8WUZ0 217 aaPredicted RBP16.98■□□□□ 0.31
CCNE1-204ENST00000574121 MTMR12Q9C0I1 747 aa16.98■□□□□ 0.31
CCNE1-204ENST00000574121 PTPRJQ12913 1337 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 SYCE3A1L190 88 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 EPOPA6NHQ4 379 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 PIRO00625 290 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 POU3F3P20264 500 aaPredicted RBP16.97■□□□□ 0.31
CCNE1-204ENST00000574121 BMS1Q14692 1282 aaKnown RBP16.97■□□□□ 0.31
CCNE1-204ENST00000574121 ZSCAN23Q3MJ62 389 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 FUT10Q6P4F1 479 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 FAM114A1Q8IWE2 563 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 GPR65Q8IYL9 337 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 DEFB123Q8N688 67 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 LRRC52Q8N7C0 313 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 OR5B17Q8NGF7 314 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 GDPD5Q8WTR4 605 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 ZNF560Q96MR9 790 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 FUCA2Q9BTY2 467 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 PRDM12Q9H4Q4 367 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 THAP9Q9H5L6 903 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 ALG13Q9NP73 1137 aaKnown RBP16.97■□□□□ 0.31
CCNE1-204ENST00000574121 CACNG4Q9UBN1 327 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 NUB1Q9Y5A7 615 aa16.97■□□□□ 0.31
CCNE1-204ENST00000574121 TULP1O00294 542 aaPredicted RBP16.96■□□□□ 0.31
CCNE1-204ENST00000574121 GRM6O15303 877 aa16.96■□□□□ 0.31
CCNE1-204ENST00000574121 LPXNO60711 386 aa16.96■□□□□ 0.31
CCNE1-204ENST00000574121 CAVIN2O95810 425 aa16.96■□□□□ 0.31
CCNE1-204ENST00000574121 SOD2P04179 222 aa16.96■□□□□ 0.31
CCNE1-204ENST00000574121 ITGB3P05106 788 aa16.96■□□□□ 0.31
CCNE1-204ENST00000574121 AARSP49588 968 aaKnown RBP eCLIP16.96■□□□□ 0.31
CCNE1-204ENST00000574121 GUCY2FP51841 1108 aa16.96■□□□□ 0.31
CCNE1-204ENST00000574121 RBP5P82980 135 aa16.96■□□□□ 0.31
CCNE1-204ENST00000574121 CCDC40Q4G0X9 1142 aa16.96■□□□□ 0.31
CCNE1-204ENST00000574121 LMBRD2Q68DH5 695 aaPredicted RBP16.96■□□□□ 0.31
CCNE1-204ENST00000574121 C11orf57Q6ZUT1 292 aaPredicted RBP16.96■□□□□ 0.31
CCNE1-204ENST00000574121 TRAPPC11Q7Z392 1133 aa16.96■□□□□ 0.31
CCNE1-204ENST00000574121 C3orf58Q8NDZ4 430 aa16.96■□□□□ 0.31
CCNE1-204ENST00000574121 CXorf38Q8TB03 319 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms