RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 AK8Q96MA6 479 aa23.09■■□□□ 1.29
CHRNB1-206ENST00000574054 RTP3Q9BQQ7 232 aa23.09■■□□□ 1.29
CHRNB1-206ENST00000574054 HCFC1R1Q9NWW0 138 aa23.09■■□□□ 1.29
CHRNB1-206ENST00000574054 LARSQ9P2J5 1176 aaKnown RBP23.09■■□□□ 1.29
CHRNB1-206ENST00000574054 WDR87Q6ZQQ6 2873 aa23.09■■□□□ 1.29
CHRNB1-206ENST00000574054 KRBA1A5PL33 1030 aa23.08■■□□□ 1.29
CHRNB1-206ENST00000574054 H0YCG3 227 aa23.08■■□□□ 1.29
CHRNB1-206ENST00000574054 MEFVO15553 781 aaPredicted RBP23.08■■□□□ 1.29
CHRNB1-206ENST00000574054 GFRA3O60609 400 aa23.08■■□□□ 1.29
CHRNB1-206ENST00000574054 RPL9P32969 192 aaKnown RBP23.08■■□□□ 1.29
CHRNB1-206ENST00000574054 ARPP19P56211 112 aa23.08■■□□□ 1.29
CHRNB1-206ENST00000574054 ZPBP2Q6X784 338 aa23.08■■□□□ 1.29
CHRNB1-206ENST00000574054 ITFG1Q8TB96 612 aa23.08■■□□□ 1.29
CHRNB1-206ENST00000574054 GPR152Q8TDT2 470 aa23.08■■□□□ 1.29
CHRNB1-206ENST00000574054 MYH11P35749 1972 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 PRRG1O14668 218 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 SLC26A4O43511 780 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 BMP15O95972 392 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 CXCL8P10145 99 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 ELF1P32519 619 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 MCM4P33991 863 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 MCL1Q07820 350 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 SLC10A6Q3KNW5 377 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 PABPC1LQ4VXU2 614 aaKnown RBP23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 PARM1Q6UWI2 310 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 BRAPQ7Z569 592 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 FGF13Q92913 245 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 REEP2Q9BRK0 252 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 CITO14578 2027 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 CFAP54Q96N23 3096 aa23.07■■□□□ 1.28
CHRNB1-206ENST00000574054 VPS37CA5D8V6 355 aaPredicted RBP23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 H7C4K7 107 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 SYN3O14994 580 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 FAM13AO94988 1023 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 KRT18P05783 430 aaKnown RBP23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 POU2F2P09086 479 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 PLCG1P19174 1290 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 NCKAP1LP55160 1127 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 ROR1Q01973 937 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 HAUS6Q7Z4H7 955 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 CCDC105Q8IYK2 499 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 MYCT1Q8N699 235 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 ING5Q8WYH8 240 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 FGF14Q92915 247 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 RPP25Q9BUL9 199 aaKnown RBP23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 TBC1D17Q9HA65 648 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 DNMT3BQ9UBC3 853 aaKnown RBP23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 TUBGCP4Q9UGJ1 667 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 ODF2LQ9ULJ1 636 aa23.06■■□□□ 1.28
CHRNB1-206ENST00000574054 K7ENM7 598 aa23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 CLTAP09496 248 aa23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 LIG4P49917 911 aa23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 SPAG1Q07617 926 aa23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 MCM6Q14566 821 aa23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 KARSQ15046 597 aaKnown RBP23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 SLC8B1Q6J4K2 584 aa23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 MTSS1LQ765P7 747 aa23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 RTL10Q7L3V2 364 aa23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 DTWD2Q8NBA8 298 aa23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 ZNF461Q8TAF7 563 aa23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 KIF12Q96FN5 646 aa23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 ZHX3Q9H4I2 956 aa23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 ARHGEF3Q9NR81 526 aa23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 KCNH3Q9ULD8 1083 aa23.05■■□□□ 1.28
CHRNB1-206ENST00000574054 WDR27A2RRH5 827 aa23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 HNRNPDLO14979 420 aaKnown RBP23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 LRG1P02750 347 aa23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 LONP1P36776 959 aaKnown RBP23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 GRIN1Q05586 938 aa23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 SF3A1Q15459 793 aaKnown RBP23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 CTXN3Q4LDR2 81 aa23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 TMEM130Q8N3G9 435 aa23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 LRRC15Q8TF66 581 aa23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 SUSD3Q96L08 255 aa23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 HAPLN2Q9GZV7 340 aa23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 PARVGQ9HBI0 331 aa23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 SLC2A4RGQ9NR83 387 aa23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 FBXL5Q9UKA1 691 aa23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 MRPS23Q9Y3D9 190 aaKnown RBP23.04■■□□□ 1.28
CHRNB1-206ENST00000574054 TBCAO75347 108 aaKnown RBP23.03■■□□□ 1.28
CHRNB1-206ENST00000574054 NPAS3Q8IXF0 933 aa23.03■■□□□ 1.28
CHRNB1-206ENST00000574054 APPL2Q8NEU8 664 aa23.03■■□□□ 1.28
CHRNB1-206ENST00000574054 RAD54LQ92698 747 aa23.03■■□□□ 1.28
CHRNB1-206ENST00000574054 KXD1Q9BQD3 176 aa23.03■■□□□ 1.28
CHRNB1-206ENST00000574054 PLEKHA5Q9HAU0 1116 aa23.03■■□□□ 1.28
CHRNB1-206ENST00000574054 CYP4F11Q9HBI6 524 aa23.03■■□□□ 1.28
CHRNB1-206ENST00000574054 BLOC1S4Q9NUP1 217 aa23.03■■□□□ 1.28
CHRNB1-206ENST00000574054 TBX20Q9UMR3 447 aa23.03■■□□□ 1.28
CHRNB1-206ENST00000574054 MYO15AQ9UKN7 3530 aa23.03■■□□□ 1.28
CHRNB1-206ENST00000574054 RIF1Q5UIP0 2472 aaKnown RBP23.02■■□□□ 1.28
CHRNB1-206ENST00000574054 PTPRZ1P23471 2315 aaPredicted RBP23.02■■□□□ 1.28
CHRNB1-206ENST00000574054 TBC1D4O60343 1298 aa23.02■■□□□ 1.28
CHRNB1-206ENST00000574054 ABLIM3O94929 683 aa23.02■■□□□ 1.28
CHRNB1-206ENST00000574054 RHOP08100 348 aa23.02■■□□□ 1.28
CHRNB1-206ENST00000574054 MARCKSP29966 332 aaPredicted RBP23.02■■□□□ 1.28
CHRNB1-206ENST00000574054 TNFSF9P41273 254 aa23.02■■□□□ 1.28
CHRNB1-206ENST00000574054 GPC5P78333 572 aa23.02■■□□□ 1.28
CHRNB1-206ENST00000574054 PPP2R3AQ06190 1150 aa23.02■■□□□ 1.28
CHRNB1-206ENST00000574054 ANGPT1Q15389 498 aa23.02■■□□□ 1.28
CHRNB1-206ENST00000574054 ZNF280DQ6N043 979 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms