RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 PLEKHA4Q9H4M7 779 aa12.36□□□□□ -0.43
RPAIN-214ENST00000574003 KCNK12Q9HB15 430 aa12.36□□□□□ -0.43
RPAIN-214ENST00000574003 HCFC1R1Q9NWW0 138 aa12.36□□□□□ -0.43
RPAIN-214ENST00000574003 MTRRQ9UBK8 725 aa12.36□□□□□ -0.43
RPAIN-214ENST00000574003 POLIQ9UNA4 740 aa12.36□□□□□ -0.43
RPAIN-214ENST00000574003 USTQ9Y2C2 406 aa12.36□□□□□ -0.43
RPAIN-214ENST00000574003 NOTCH4Q99466 2003 aa12.36□□□□□ -0.43
RPAIN-214ENST00000574003 CACNA1HO95180 2353 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 TTC26A0AVF1 554 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 HNRNPDLO14979 420 aaKnown RBP12.35□□□□□ -0.43
RPAIN-214ENST00000574003 FAM189A1O60320 539 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 CREMQ03060 361 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 KCNA1Q09470 495 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 MTMR3Q13615 1198 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 RAB33AQ14088 237 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 PPM1LQ5SGD2 360 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 VARS2Q5ST30 1063 aaKnown RBP12.35□□□□□ -0.43
RPAIN-214ENST00000574003 RRAGBQ5VZM2 374 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 BMP8AQ7Z5Y6 402 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 FBXL6Q8N531 539 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 PDILTQ8N807 584 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 ZSWIM2Q8NEG5 633 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 PRSS33Q8NF86 280 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 SLC7A14Q8TBB6 771 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 HDAC7Q8WUI4 952 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 STAMQ92783 540 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 ACSF2Q96CM8 615 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-214ENST00000574003 KIF12Q96FN5 646 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 SLC38A7Q9NVC3 462 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 ZDHHC7Q9NXF8 308 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 NUB1Q9Y5A7 615 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 TIMM13Q9Y5L4 95 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-214ENST00000574003 GTF3C3Q9Y5Q9 886 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 KMT2EQ8IZD2 1858 aa12.35□□□□□ -0.43
RPAIN-214ENST00000574003 PIGRP01833 764 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 CLTAP09496 248 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 MCM4P33991 863 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 ACOT2P49753 483 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 CDR1P51861 262 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 ROR1Q01973 937 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 PKP1Q13835 747 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 SLC39A14Q15043 492 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 AXDND1Q5T1B0 1012 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-214ENST00000574003 LIN9Q5TKA1 542 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 SUGP1Q8IWZ8 645 aaKnown RBP12.34□□□□□ -0.43
RPAIN-214ENST00000574003 ITFG1Q8TB96 612 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 DDX12PQ92771 950 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 SNX21Q969T3 373 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 DNAJC19Q96DA6 116 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 FAM84AQ96KN4 292 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 MSTO1Q9BUK6 570 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 RPP25Q9BUL9 199 aaKnown RBP12.34□□□□□ -0.43
RPAIN-214ENST00000574003 CCDC39Q9UFE4 941 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 MYH15Q9Y2K3 1946 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 ANK1P16157 1881 aa12.34□□□□□ -0.43
RPAIN-214ENST00000574003 A0A0B4J269 797 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 WDR27A2RRH5 827 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 H0YCG3 227 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 TULP1O00294 542 aaPredicted RBP12.33□□□□□ -0.44
RPAIN-214ENST00000574003 NRG2O14511 850 aaPredicted RBP12.33□□□□□ -0.44
RPAIN-214ENST00000574003 OGTO15294 1046 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 PAPLNO95428 1278 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 SEC24AO95486 1093 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 NFICP08651 508 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 FSHRP23945 695 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 CASP5P51878 434 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 GTF2BQ00403 316 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 NHLH1Q02575 133 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 STK38Q15208 465 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 ZBTB6Q15916 424 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 JADE1Q6IE81 842 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 ELMSAN1Q6PJG2 1045 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 POTEHQ6S545 545 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 ANKS3Q6ZW76 656 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 MAP4K3Q8IVH8 894 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 KRI1Q8N9T8 703 aaKnown RBP12.33□□□□□ -0.44
RPAIN-214ENST00000574003 LINC00301Q8NCQ3 95 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 SUSD3Q96L08 255 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 PHOX2BQ99453 314 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 RPF1Q9H9Y2 349 aaKnown RBP12.33□□□□□ -0.44
RPAIN-214ENST00000574003 DNMT3BQ9UBC3 853 aaKnown RBP12.33□□□□□ -0.44
RPAIN-214ENST00000574003 STK17AQ9UEE5 414 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 DPP7Q9UHL4 492 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 KCNG1Q9UIX4 513 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 FBXL5Q9UKA1 691 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 BACE2Q9Y5Z0 518 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 SCN1AP35498 2009 aa12.33□□□□□ -0.44
RPAIN-214ENST00000574003 PIEZO1Q92508 2521 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 TRAPPC3O43617 180 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 TBC1D4O60343 1298 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 CFHP08603 1231 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 OR4Q2P0C623 313 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 LAMP2P13473 410 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 IDEP14735 1019 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 AVPR2P30518 371 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 RPL9P32969 192 aaKnown RBP12.32□□□□□ -0.44
RPAIN-214ENST00000574003 STAT6P42226 847 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 NASPP49321 788 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-214ENST00000574003 WNT7BP56706 349 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms