RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ATP9AO75110 1047 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 KRT16P08779 473 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 STX2P32856 288 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 MGAT5Q09328 741 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 KLF1Q13351 362 aaPredicted RBP20.3■□□□□ 0.84
SCARF1-206ENST00000573852 TMEM63BQ5T3F8 832 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 PCNX4Q63HM2 1172 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 FBXL18Q96ME1 805 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 EBF2Q9HAK2 575 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 TMOD2Q9NZR1 351 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 TRIM33Q9UPN9 1127 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 CCNE2O96020 404 aa20.29■□□□□ 0.84
SCARF1-206ENST00000573852 ALADP13716 330 aa20.29■□□□□ 0.84
SCARF1-206ENST00000573852 GBP7Q8N8V2 638 aaPredicted RBP20.29■□□□□ 0.84
SCARF1-206ENST00000573852 FAM151AQ8WW52 585 aa20.29■□□□□ 0.84
SCARF1-206ENST00000573852 PRCCQ92733 491 aaPredicted RBP20.29■□□□□ 0.84
SCARF1-206ENST00000573852 KLHL29Q96CT2 875 aa20.29■□□□□ 0.84
SCARF1-206ENST00000573852 ADGRA3Q8IWK6 1321 aa20.29■□□□□ 0.84
SCARF1-206ENST00000573852 SPDYE2BA6NHP3 402 aa20.29■□□□□ 0.84
SCARF1-206ENST00000573852 A8MUI8 341 aa20.29■□□□□ 0.84
SCARF1-206ENST00000573852 HGSO14964 777 aaPredicted RBP20.29■□□□□ 0.84
SCARF1-206ENST00000573852 SPDYE6P0CI01 402 aa20.29■□□□□ 0.84
SCARF1-206ENST00000573852 SLC1A1P43005 524 aa20.29■□□□□ 0.84
SCARF1-206ENST00000573852 POMGNT1Q8WZA1 660 aa20.29■□□□□ 0.84
SCARF1-206ENST00000573852 FAM212AQ96EL1 285 aa20.29■□□□□ 0.84
SCARF1-206ENST00000573852 RXFP1Q9HBX9 757 aa20.29■□□□□ 0.84
SCARF1-206ENST00000573852 TBC1D22BQ9NU19 505 aa20.29■□□□□ 0.84
SCARF1-206ENST00000573852 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.29■□□□□ 0.84
SCARF1-206ENST00000573852 CNTNAP1P78357 1384 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 EIF2AK2P19525 551 aaKnown RBP20.28■□□□□ 0.84
SCARF1-206ENST00000573852 FOXN2P32314 431 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 PSMC5P62195 406 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 GCNT1Q02742 428 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 CENPCQ03188 943 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 MYO1EQ12965 1108 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 ANKS1BQ7Z6G8 1248 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 MAGEB18Q96M61 343 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 KMT5AQ9NQR1 393 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 ZNF70Q9UC06 446 aaPredicted RBP20.28■□□□□ 0.84
SCARF1-206ENST00000573852 UMODL1Q5DID0 1318 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 CDH16O75309 829 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 GTF2H1P32780 548 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 TAS2R40P59535 323 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 DMP1Q13316 513 aaPredicted RBP20.28■□□□□ 0.84
SCARF1-206ENST00000573852 IZUMO3Q5VZ72 239 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 CPXCR1Q8N123 301 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 SLC17A8Q8NDX2 589 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 L3MBTL3Q96JM7 780 aaPredicted RBP20.28■□□□□ 0.84
SCARF1-206ENST00000573852 TAAR1Q96RJ0 339 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 ARHGEF3Q9NR81 526 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 HOMER2Q9NSB8 354 aa20.28■□□□□ 0.84
SCARF1-206ENST00000573852 PROSCO94903 275 aa20.27■□□□□ 0.84
SCARF1-206ENST00000573852 ANP32DO95626 131 aa20.27■□□□□ 0.84
SCARF1-206ENST00000573852 TAC1P20366 129 aa20.27■□□□□ 0.84
SCARF1-206ENST00000573852 ARHGEF18Q6ZSZ5 1173 aa20.27■□□□□ 0.84
SCARF1-206ENST00000573852 ANO5Q75V66 913 aa20.27■□□□□ 0.84
SCARF1-206ENST00000573852 ANKLE1Q8NAG6 615 aa20.27■□□□□ 0.84
SCARF1-206ENST00000573852 SYTL5Q8TDW5 730 aaPredicted RBP20.27■□□□□ 0.84
SCARF1-206ENST00000573852 ZNF516Q92618 1163 aa20.27■□□□□ 0.84
SCARF1-206ENST00000573852 FAM81BQ96LP2 452 aa20.27■□□□□ 0.84
SCARF1-206ENST00000573852 EURLQ9NYK6 297 aa20.27■□□□□ 0.84
SCARF1-206ENST00000573852 CFHP08603 1231 aa20.27■□□□□ 0.83
SCARF1-206ENST00000573852 FDX1P10109 184 aa20.27■□□□□ 0.83
SCARF1-206ENST00000573852 CCNG2Q16589 344 aa20.27■□□□□ 0.83
SCARF1-206ENST00000573852 ZNF365Q70YC5 407 aa20.27■□□□□ 0.83
SCARF1-206ENST00000573852 ASRGL1Q7L266 308 aa20.27■□□□□ 0.83
SCARF1-206ENST00000573852 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.27■□□□□ 0.83
SCARF1-206ENST00000573852 NSMCE1Q8WV22 266 aa20.27■□□□□ 0.83
SCARF1-206ENST00000573852 NKIRAS1Q9NYS0 192 aa20.27■□□□□ 0.83
SCARF1-206ENST00000573852 GBP2P32456 591 aaPredicted RBP20.26■□□□□ 0.83
SCARF1-206ENST00000573852 PTP4A2Q12974 167 aa20.26■□□□□ 0.83
SCARF1-206ENST00000573852 MKRN3Q13064 507 aaKnown RBP20.26■□□□□ 0.83
SCARF1-206ENST00000573852 LMBRD2Q68DH5 695 aaPredicted RBP20.26■□□□□ 0.83
SCARF1-206ENST00000573852 PLCD4Q9BRC7 762 aa20.26■□□□□ 0.83
SCARF1-206ENST00000573852 ANKEF1Q9NU02 776 aa20.26■□□□□ 0.83
SCARF1-206ENST00000573852 STK38LQ9Y2H1 464 aa20.26■□□□□ 0.83
SCARF1-206ENST00000573852 PCDHB2Q9Y5E7 798 aa20.26■□□□□ 0.83
SCARF1-206ENST00000573852 MYBL1P10243 752 aa20.26■□□□□ 0.83
SCARF1-206ENST00000573852 MYCLP12524 364 aaPredicted RBP20.26■□□□□ 0.83
SCARF1-206ENST00000573852 NSFP46459 744 aaKnown RBP20.26■□□□□ 0.83
SCARF1-206ENST00000573852 MTFR1Q15390 333 aa20.26■□□□□ 0.83
SCARF1-206ENST00000573852 MEX3CQ5U5Q3 659 aaKnown RBP20.26■□□□□ 0.83
SCARF1-206ENST00000573852 MON1BQ7L1V2 547 aa20.26■□□□□ 0.83
SCARF1-206ENST00000573852 ENOSF1Q7L5Y1 443 aa20.26■□□□□ 0.83
SCARF1-206ENST00000573852 ECHDC2Q86YB7 292 aa20.26■□□□□ 0.83
SCARF1-206ENST00000573852 CCHCR1Q8TD31 782 aa20.26■□□□□ 0.83
SCARF1-206ENST00000573852 FAM213AQ9BRX8 229 aa20.26■□□□□ 0.83
SCARF1-206ENST00000573852 TMEM39BQ9GZU3 492 aa20.26■□□□□ 0.83
SCARF1-206ENST00000573852 CYP1A1P04798 512 aaPredicted RBP20.25■□□□□ 0.83
SCARF1-206ENST00000573852 CLNS1AP54105 237 aaKnown RBP20.25■□□□□ 0.83
SCARF1-206ENST00000573852 WDR4P57081 412 aaKnown RBP20.25■□□□□ 0.83
SCARF1-206ENST00000573852 STAT4Q14765 748 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 CYP4F22Q6NT55 531 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 KIRREL3Q8IZU9 778 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 GPD1LQ8N335 351 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 CCDC89Q8N998 374 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 MAML1Q92585 1016 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 THOC1Q96FV9 657 aaKnown RBP20.25■□□□□ 0.83
SCARF1-206ENST00000573852 OSBPL8Q9BZF1 889 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 C1orf112Q9NSG2 853 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms