RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 IFT74Q96LB3 600 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 C9orf72Q96LT7 481 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 MAGEB18Q96M61 343 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 EBF2Q9HAK2 575 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 KLHL14Q9P2G3 628 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 LGALS13Q9UHV8 139 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 COL2A1P02458 1487 aaPredicted RBP16.64■□□□□ 0.25
NUP88-207ENST00000573584 HGSO14964 777 aaPredicted RBP16.64■□□□□ 0.25
NUP88-207ENST00000573584 ANP32DO95626 131 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 GTF2H1P32780 548 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 PSMC5P62195 406 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 GCNT1Q02742 428 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 CENPCQ03188 943 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 CCDC89Q8N998 374 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 TCEAL9Q9UHQ7 104 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 GSTTP1A0A1W2PQM5 241 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 KRT16P08779 473 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 CLNS1AP54105 237 aaKnown RBP16.64■□□□□ 0.25
NUP88-207ENST00000573584 CYP24A1Q07973 514 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 PCNX4Q63HM2 1172 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 ENOSF1Q7L5Y1 443 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 RMDN2Q96LZ7 410 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 KMT5AQ9NQR1 393 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 STK38LQ9Y2H1 464 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 NEU2Q9Y3R4 380 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 ZNF536O15090 1300 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 ADGRA3Q8IWK6 1321 aa16.64■□□□□ 0.25
NUP88-207ENST00000573584 MYBL1P10243 752 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 ALADP13716 330 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 CAP2P40123 477 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 PTGER2P43116 358 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 NSFP46459 744 aaKnown RBP16.63■□□□□ 0.25
NUP88-207ENST00000573584 STRN3Q13033 797 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 KLF1Q13351 362 aaPredicted RBP16.63■□□□□ 0.25
NUP88-207ENST00000573584 CCNG2Q16589 344 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 IZUMO3Q5VZ72 239 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 BBOF1Q8ND07 529 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 NSMCE1Q8WV22 266 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 FAM84AQ96KN4 292 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 FBXL18Q96ME1 805 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 ARHGEF3Q9NR81 526 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 MYPNQ86TC9 1320 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 STAT4Q14765 748 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 CGB2Q6NT52 195 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 SLC39A4Q6P5W5 647 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 PPP1R21Q6ZMI0 780 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.63■□□□□ 0.25
NUP88-207ENST00000573584 CPXCR1Q8N123 301 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 FAM151AQ8WW52 585 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 CLEC4DQ8WXI8 215 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 PRCCQ92733 491 aaPredicted RBP16.63■□□□□ 0.25
NUP88-207ENST00000573584 TRIM11Q96F44 468 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 RSRC1Q96IZ7 334 aaKnown RBP16.63■□□□□ 0.25
NUP88-207ENST00000573584 C1orf112Q9NSG2 853 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 DONSONQ9NYP3 566 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 PCDHB2Q9Y5E7 798 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 A0A1B0GUA9 196 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 RASA4BC9J798 803 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 RASA4O43374 803 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 ATP9AO75110 1047 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 EIF2AK2P19525 551 aaKnown RBP16.63■□□□□ 0.25
NUP88-207ENST00000573584 ANKRD35Q8N283 1001 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 FAM212AQ96EL1 285 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 PITPNM3Q9BZ71 974 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 HOMER2Q9NSB8 354 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 SUFUQ9UMX1 484 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 TRIM33Q9UPN9 1127 aa16.63■□□□□ 0.25
NUP88-207ENST00000573584 PROSCO94903 275 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 MTFR1Q15390 333 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 TMEM63BQ5T3F8 832 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 GSTA5Q7RTV2 222 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 MCF2L2Q86YR7 1114 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 MIEF2Q96C03 454 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 THOC1Q96FV9 657 aaKnown RBP16.62■□□□□ 0.25
NUP88-207ENST00000573584 L3MBTL3Q96JM7 780 aaPredicted RBP16.62■□□□□ 0.25
NUP88-207ENST00000573584 PAIP2Q9BPZ3 127 aaKnown RBP16.62■□□□□ 0.25
NUP88-207ENST00000573584 ANKEF1Q9NU02 776 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 SPDYE2BA6NHP3 402 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 SPDYE6P0CI01 402 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 MYCLP12524 364 aaPredicted RBP16.62■□□□□ 0.25
NUP88-207ENST00000573584 TAC1P20366 129 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 SOX10P56693 466 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 IL9RQ01113 521 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 MGAT5Q09328 741 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 MEX3CQ5U5Q3 659 aaKnown RBP16.62■□□□□ 0.25
NUP88-207ENST00000573584 CYP4F22Q6NT55 531 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 ASRGL1Q7L266 308 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 PRUNE1Q86TP1 453 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 RHOT1Q8IXI2 618 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 BSNDQ8WZ55 320 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 RBM15Q96T37 977 aaKnown RBP eCLIP16.62■□□□□ 0.257e-12■■□□□ 12.2
NUP88-207ENST00000573584 FAM213AQ9BRX8 229 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 OSBPL8Q9BZF1 889 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 C15orf41Q9Y2V0 281 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 ACTL7BQ9Y614 415 aa16.62■□□□□ 0.25
NUP88-207ENST00000573584 A8MUI8 341 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 WDR64B1ANS9 1081 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 HNRNPDLO14979 420 aaKnown RBP16.61■□□□□ 0.25
NUP88-207ENST00000573584 CCNE2O96020 404 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 FOXN2P32314 431 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms