RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 KIF12Q96FN5 646 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 MYADMQ96S97 322 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 BACH2Q9BYV9 841 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 RHOBTB2Q9BYZ6 727 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 BLOC1S4Q9NUP1 217 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 TUBGCP4Q9UGJ1 667 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 DUSP12Q9UNI6 340 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 SCN1AP35498 2009 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 H7C4K7 107 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 K7ELQ4 463 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 TULP1O00294 542 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 STK25O00506 426 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 XPOTO43592 962 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 LRG1P02750 347 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 CLTAP09496 248 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 HNRNPA1P09651 372 aaKnown RBP eCLIP10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 AVPR2P30518 371 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 HOXD11P31277 338 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 ELF1P32519 619 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 RPL9P32969 192 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 SPAG1Q07617 926 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 RESTQ13127 1097 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 RAB33AQ14088 237 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 SLC10A6Q3KNW5 377 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 VARS2Q5ST30 1063 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 ZNF280DQ6N043 979 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 FAM173BQ6P4H8 233 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 DYMQ7RTS9 669 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 ALYREFQ86V81 257 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 LRRC15Q8TF66 581 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 RSAD2Q8WXG1 361 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 EPSTI1Q96J88 318 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 MSTO1Q9BUK6 570 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 CCSER1Q9C0I3 900 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 RPF1Q9H9Y2 349 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 EPS15L1Q9UBC2 864 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 TBX20Q9UMR3 447 aa10.52□□□□□ -0.73
NPLOC4-212ENST00000573328 PRRG1O14668 218 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 SYN3O14994 580 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 OGTO15294 1046 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 NARSO43776 548 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 HSP90AA1P07900 732 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 CFHP08603 1231 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 CPB1P15086 417 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 SCP2P22307 547 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 NMT1P30419 496 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 HOXA9P31269 272 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 ABCD1P33897 745 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 TNFSF9P41273 254 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 ZNF131P52739 623 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 NTHL1P78549 312 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 ROR1Q01973 937 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 PTPAQ15257 358 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 KYAT1Q16773 422 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 CTXN3Q4LDR2 81 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 RRAGBQ5VZM2 374 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 CD300LGQ6UXG3 332 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 RSPO2Q6UXX9 243 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 SIX5Q8N196 739 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 APPL2Q8NEU8 664 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 ST13P5Q8NFI4 369 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 INTS4Q96HW7 963 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 CLIC6Q96NY7 704 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 STK17AQ9UEE5 414 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 FBXO2Q9UK22 296 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 UBQLN1Q9UMX0 589 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 SRPRBQ9Y5M8 271 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 BACE2Q9Y5Z0 518 aa10.51□□□□□ -0.73
NPLOC4-212ENST00000573328 ZNF638Q14966 1978 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 WDR27A2RRH5 827 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 MEFVO15553 781 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 STX6O43752 255 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 LAMP2P13473 410 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 DDIT3P35638 169 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 STAT6P42226 847 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 MRE11P49959 708 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 STK38Q15208 465 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 UVSSAQ2YD98 709 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 PABPC1LQ4VXU2 614 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 ASTLQ6HA08 431 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 DSTYKQ6XUX3 929 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 USP49Q70CQ1 688 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 SV2BQ7L1I2 683 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 SFR1Q86XK3 245 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 HSCBQ8IWL3 235 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 PIAS4Q8N2W9 510 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 ING5Q8WYH8 240 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 NXPE3Q969Y0 559 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 SUSD3Q96L08 255 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 HAPLN2Q9GZV7 340 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 ZSCAN16Q9H4T2 348 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 PLEKHA5Q9HAU0 1116 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 CYP4F11Q9HBI6 524 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 FAM86C1Q9NVL1 165 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 HCFC1R1Q9NWW0 138 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 CA14Q9ULX7 337 aa10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 ZFP37Q9Y6Q3 630 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-212ENST00000573328 NUMBLQ9Y6R0 609 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms