RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 MCF2LO15068 1137 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 HTRA2O43464 458 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 EIF4EBP3O60516 100 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 TBX10O75333 385 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 SASH1O94885 1247 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 GZMAP12544 262 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 IL10P22301 178 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 PAX7P23759 505 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 SLC7A1P30825 629 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 DPP6P42658 865 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 MTHFRP42898 656 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 RPIAP49247 311 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 SULT1E1P49888 294 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 RNF144AP50876 292 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 MAP2K6P52564 334 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 KIF11P52732 1056 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 ETF1P62495 437 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 LACTBP83111 547 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 RELBQ01201 579 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 ACTN3Q08043 901 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 COASYQ13057 564 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 MORF4L2Q15014 288 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 POU4F3Q15319 338 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 UGT8Q16880 541 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 GEN1Q17RS7 908 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.46□□□□□ -1.548e-6■■■■■ 36.9
TOPBP1-210ENST00000572787 KIZQ2M2Z5 673 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 ALG11Q2TAA5 492 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 NOL9Q5SY16 702 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 SAMD5Q5TGI4 173 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 CIAPIN1Q6FI81 312 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 BORAQ6PGQ7 559 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 OLFM4Q6UX06 510 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 ARHGEF18Q6ZSZ5 1173 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 PIWIL3Q7Z3Z3 882 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 SZRD1Q7Z422 152 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 VN1R5Q7Z5H4 357 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 THAP5Q7Z6K1 395 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 TTC7BQ86TV6 843 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 RTN4RL1Q86UN2 441 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 SIRT2Q8IXJ6 389 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 ADSSL1Q8N142 457 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 OXR1Q8N573 874 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 PLBD2Q8NHP8 589 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 SYTL5Q8TDW5 730 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 SH3RF3Q8TEJ3 882 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 GRK7Q8WTQ7 553 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 STYXQ8WUJ0 223 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 RGMAQ96B86 450 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 IQCDQ96DY2 449 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 RNF125Q96EQ8 232 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 SUCLG2Q96I99 432 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 NSUN5Q96P11 429 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 POP1Q99575 1024 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 CRACR2AQ9BSW2 395 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 ITPAQ9BY32 194 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 WNT10AQ9GZT5 417 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 PCIF1Q9H4Z3 704 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 MROH8Q9H579 483 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 ZMAT4Q9H898 229 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 SP110Q9HB58 689 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 SOX13Q9UN79 622 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 MAN2B2Q9Y2E5 1009 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 CAB39Q9Y376 341 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 FHOD1Q9Y613 1164 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 CFAP20Q9Y6A4 193 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 LMTK3Q96Q04 1460 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 CLRN2A0PK11 232 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 PRAMEF27A3QJZ7 478 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 CCDC151A5D8V7 595 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 HMX3A6NHT5 357 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 M0QX08 132 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 RNF225M0QZC1 329 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 PODXLO00592 558 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 VILLO15195 856 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 CCP110O43303 1012 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 SMNDC1O75940 238 aaKnown RBP eCLIP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 DLGAP3O95886 979 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 MMEP08473 750 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 ITGA2BP08514 1039 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 SNRPA1P09661 255 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 ESRRAP11474 423 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 PTPN2P17706 415 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 NFKB1P19838 968 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 KCNA5P22460 613 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 TGM1P22735 817 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 EDNRBP24530 442 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 AKT1P31749 480 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 MATR3P43243 847 aaKnown RBP eCLIP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 IFNAR2P48551 515 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 AARSP49588 968 aaKnown RBP eCLIP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 C21orf58P58505 322 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 HTD2P86397 168 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 AMPD2Q01433 879 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 MECOMQ03112 1051 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 SUZ12Q15022 739 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 TESK1Q15569 626 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 CRY1Q16526 586 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 BAK1Q16611 211 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms