RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 WNT7BP56706 349 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 KRT17Q04695 432 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 SOX4Q06945 474 aaPredicted RBP15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 BFSP1Q12934 665 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 ZBTB6Q15916 424 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 EPC2Q52LR7 807 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 TCERG1LQ5VWI1 586 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 SPATA1Q5VX52 437 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 WDR49Q8IV35 697 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 FAM114A1Q8IWE2 563 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 ZC3H3Q8IXZ2 948 aaKnown RBP15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 TMC2Q8TDI7 906 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 RABGGTAQ92696 567 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 INTS13Q9NVM9 706 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 MAGEC2Q9UBF1 373 aaPredicted RBP15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 CACNG4Q9UBN1 327 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 ARMCX3Q9UH62 379 aaPredicted RBP15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 MYO7AQ13402 2215 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 PODXLO00592 558 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 B4GALT3O60512 393 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 PHACTR2O75167 634 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 B3GAT3O94766 335 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 CLSTN1O94985 981 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 KRT19P08727 400 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 CLCNKBP51801 687 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 GUCY2FP51841 1108 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 AP3M2P53677 418 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 GPM6BQ13491 265 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 NAB2Q15742 525 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 DCAF17Q5H9S7 520 aaPredicted RBP15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 DCLRE1AQ6PJP8 1040 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 SPRED2Q7Z698 418 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 FRMD5Q7Z6J6 570 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 SLC39A11Q8N1S5 342 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 KLHL23Q8NBE8 558 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 ENOX1Q8TC92 643 aaKnown RBP15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 PARD3BQ8TEW8 1205 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 POP1Q99575 1024 aaKnown RBP15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 C11orf84Q9BUA3 381 aaPredicted RBP15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 MTMR12Q9C0I1 747 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 MMRN2Q9H8L6 949 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 PUF60Q9UHX1 559 aaKnown RBP15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 NUB1Q9Y5A7 615 aa15.69■□□□□ 0.1
NPLOC4-209ENST00000572760 LRRIQ3A6PVS8 624 aaPredicted RBP15.68■□□□□ 0.1
NPLOC4-209ENST00000572760 STX10O60499 249 aa15.68■□□□□ 0.1
NPLOC4-209ENST00000572760 FGF18O76093 207 aa15.68■□□□□ 0.1
NPLOC4-209ENST00000572760 LRPAP1P30533 357 aa15.68■□□□□ 0.1
NPLOC4-209ENST00000572760 BIRC3Q13489 604 aa15.68■□□□□ 0.1
NPLOC4-209ENST00000572760 OR5B17Q8NGF7 314 aa15.68■□□□□ 0.1
NPLOC4-209ENST00000572760 PLEKHO2Q8TD55 490 aa15.68■□□□□ 0.1
NPLOC4-209ENST00000572760 HASPINQ8TF76 798 aa15.68■□□□□ 0.1
NPLOC4-209ENST00000572760 IGSF21Q96ID5 467 aa15.68■□□□□ 0.1
NPLOC4-209ENST00000572760 PAAF1Q9BRP4 392 aa15.68■□□□□ 0.1
NPLOC4-209ENST00000572760 NFE2L3Q9Y4A8 694 aa15.68■□□□□ 0.1
NPLOC4-209ENST00000572760 SMTNL1A8MU46 457 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 BECN2A8MW95 431 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 C5orf67F2Z3F1 127 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 IKBKBO14920 756 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 ITGB3P05106 788 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 LINC00271P0C7V0 271 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 TRIM49P0CI25 452 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 TRIM49CP0CI26 452 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 MTIF2P46199 727 aaKnown RBP15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 ZNF165P49910 485 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 DLG4P78352 724 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 RBP5P82980 135 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 MYL5Q02045 173 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 ENPEPQ07075 957 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 TRPC3Q13507 836 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 UPP1Q16831 310 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 C9orf57Q5W0N0 161 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 FAM84AQ96KN4 292 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 CNOT6LQ96LI5 555 aaKnown RBP15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 ZNF560Q96MR9 790 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 MED15Q96RN5 788 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 FUCA2Q9BTY2 467 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 THAP9Q9H5L6 903 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 ALG13Q9NP73 1137 aaKnown RBP15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 ADAM28Q9UKQ2 775 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 ITGA11Q9UKX5 1188 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 AGAP1Q9UPQ3 857 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 PTPRJQ12913 1337 aa15.67■□□□□ 0.1
NPLOC4-209ENST00000572760 H3BNC9 293 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 TRAPPC3O43617 180 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 KIF4AO95239 1232 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 CAVIN2O95810 425 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 ITGB1P05556 798 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 POLR2BP30876 1174 aaKnown RBP15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 GCLMP48507 274 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 PLCB3Q01970 1234 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 ELAVL2Q12926 359 aaKnown RBP15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 BMS1Q14692 1282 aaKnown RBP15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 HSP90AA4PQ58FG1 418 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 TRAPPC11Q7Z392 1133 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 TMEM173Q86WV6 379 aaPredicted RBP15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 AOPEPQ8N6M6 819 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 C1orf127Q8N9H9 656 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 GDPD5Q8WTR4 605 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 BORCS6Q96GS4 357 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 FAM161BQ96MY7 647 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms