RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 TMC7Q7Z402 723 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 BRSK2Q8IWQ3 736 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 GPD1LQ8N335 351 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 C3orf58Q8NDZ4 430 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 SMARCE1Q969G3 411 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 B3GALT6Q96L58 329 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 COLEC11Q9BWP8 271 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 RMND1Q9NWS8 449 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 RBAKQ9NYW8 714 aaPredicted RBP17.17■□□□□ 0.34
CHD3-215ENST00000572750 ADAM28Q9UKQ2 775 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 PCDHA5Q9Y5H7 936 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 HIDE1A8MVS5 230 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 PODXLO00592 558 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 ADRB2P07550 413 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 GTF2F1P35269 517 aaKnown RBP eCLIP17.16■□□□□ 0.34
CHD3-215ENST00000572750 SMC1AQ14683 1233 aaKnown RBP17.16■□□□□ 0.34
CHD3-215ENST00000572750 TMEM132DQ14C87 1099 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 UPP1Q16831 310 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 FUT10Q6P4F1 479 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 RBM23Q86U06 439 aaKnown RBP17.16■□□□□ 0.34
CHD3-215ENST00000572750 CBWD2Q8IUF1 395 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 EFCAB13Q8IY85 973 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 GJD3Q8N144 294 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 SPATA20Q8TB22 786 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 UROC1Q96N76 676 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 HERC2P3Q9BVR0 1158 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 GPR62Q9BZJ7 368 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 KCTD10Q9H3F6 313 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 LMBRD1Q9NUN5 540 aa17.16■□□□□ 0.34
CHD3-215ENST00000572750 SF3B1O75533 1304 aaKnown RBP eCLIP17.16■□□□□ 0.342e-6■■■■□ 26.7
CHD3-215ENST00000572750 WDR87Q6ZQQ6 2873 aa17.15■□□□□ 0.34
CHD3-215ENST00000572750 TSC2P49815 1807 aa17.15■□□□□ 0.34
CHD3-215ENST00000572750 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.15■□□□□ 0.34
CHD3-215ENST00000572750 TADA2AO75478 443 aa17.15■□□□□ 0.34
CHD3-215ENST00000572750 B3GAT3O94766 335 aa17.15■□□□□ 0.34
CHD3-215ENST00000572750 EFEMP2O95967 443 aa17.15■□□□□ 0.34
CHD3-215ENST00000572750 LDHAP00338 332 aaKnown RBP17.15■□□□□ 0.34
CHD3-215ENST00000572750 SOD2P04179 222 aa17.15■□□□□ 0.34
CHD3-215ENST00000572750 CTSAP10619 480 aa17.15■□□□□ 0.34
CHD3-215ENST00000572750 NRIP1P48552 1158 aa17.15■□□□□ 0.34
CHD3-215ENST00000572750 HYAL1Q12794 435 aa17.15■□□□□ 0.34
CHD3-215ENST00000572750 PTPN14Q15678 1187 aa17.15■□□□□ 0.34
CHD3-215ENST00000572750 CAMK4Q16566 473 aa17.15■□□□□ 0.34
CHD3-215ENST00000572750 TAS1R1Q7RTX1 841 aa17.15■□□□□ 0.34
CHD3-215ENST00000572750 RNF168Q8IYW5 571 aaPredicted RBP17.15■□□□□ 0.34
CHD3-215ENST00000572750 FAM84AQ96KN4 292 aa17.15■□□□□ 0.34
CHD3-215ENST00000572750 GSDMAQ96QA5 445 aa17.15■□□□□ 0.34
CHD3-215ENST00000572750 NGRNQ9NPE2 291 aaKnown RBP17.15■□□□□ 0.34
CHD3-215ENST00000572750 UBQLN1Q9UMX0 589 aaKnown RBP17.15■□□□□ 0.34
CHD3-215ENST00000572750 C2orf71A6NGG8 1288 aa17.14■□□□□ 0.33
CHD3-215ENST00000572750 I3L4J1 428 aa17.14■□□□□ 0.33
CHD3-215ENST00000572750 C2CD2LO14523 706 aa17.14■□□□□ 0.33
CHD3-215ENST00000572750 PER2O15055 1255 aa17.14■□□□□ 0.33
CHD3-215ENST00000572750 KIAA0391O15091 583 aaKnown RBP17.14■□□□□ 0.33
CHD3-215ENST00000572750 IL18RAPO95256 599 aa17.14■□□□□ 0.33
CHD3-215ENST00000572750 URODP06132 367 aa17.14■□□□□ 0.33
CHD3-215ENST00000572750 ZBTB6Q15916 424 aa17.14■□□□□ 0.33
CHD3-215ENST00000572750 SNRNP35Q16560 246 aaKnown RBP17.14■□□□□ 0.33
CHD3-215ENST00000572750 ISM2Q6H9L7 571 aa17.14■□□□□ 0.33
CHD3-215ENST00000572750 PDE12Q6L8Q7 609 aaKnown RBP17.14■□□□□ 0.33
CHD3-215ENST00000572750 CD302Q8IX05 232 aa17.14■□□□□ 0.33
CHD3-215ENST00000572750 ELOA2Q8IYF1 753 aaPredicted RBP17.14■□□□□ 0.33
CHD3-215ENST00000572750 GUF1Q8N442 669 aaKnown RBP17.14■□□□□ 0.33
CHD3-215ENST00000572750 GOLGA5Q8TBA6 731 aa17.14■□□□□ 0.33
CHD3-215ENST00000572750 IGFLR1Q9H665 355 aa17.14■□□□□ 0.33
CHD3-215ENST00000572750 ASB7Q9H672 318 aa17.14■□□□□ 0.33
CHD3-215ENST00000572750 MAN1B1Q9UKM7 699 aa17.14■□□□□ 0.33
CHD3-215ENST00000572750 PLXNA3P51805 1871 aa17.14■□□□□ 0.33
CHD3-215ENST00000572750 TMEM189-UBE2V1I3L0A0 370 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 PPEF2O14830 753 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 LINC01565O15544 149 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 NR3C1P04150 777 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 GLUD2P49448 558 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 SNRPFP62306 86 aaKnown RBP17.13■□□□□ 0.33
CHD3-215ENST00000572750 ZNF658Q5TYW1 1059 aaPredicted RBP17.13■□□□□ 0.33
CHD3-215ENST00000572750 DCLRE1AQ6PJP8 1040 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 CD300LGQ6UXG3 332 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 C12orf56Q8IXR9 622 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 XXYLT1Q8NBI6 393 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 RDH13Q8NBN7 331 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 BEST2Q8NFU1 509 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.13■□□□□ 0.33
CHD3-215ENST00000572750 PPP2R3CQ969Q6 453 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 TLE6Q9H808 572 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 PDE11AQ9HCR9 933 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 CGNQ9P2M7 1197 aaKnown RBP17.13■□□□□ 0.33
CHD3-215ENST00000572750 STK39Q9UEW8 545 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 DERAQ9Y315 318 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 C2CD2Q9Y426 696 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 PTPRJQ12913 1337 aa17.13■□□□□ 0.33
CHD3-215ENST00000572750 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.12■□□□□ 0.33
CHD3-215ENST00000572750 BIN1O00499 593 aa17.12■□□□□ 0.33
CHD3-215ENST00000572750 PDXKO00764 312 aa17.12■□□□□ 0.33
CHD3-215ENST00000572750 XPOTO43592 962 aaKnown RBP17.12■□□□□ 0.33
CHD3-215ENST00000572750 KIF20AO95235 890 aa17.12■□□□□ 0.33
CHD3-215ENST00000572750 CXCL14O95715 111 aa17.12■□□□□ 0.33
CHD3-215ENST00000572750 IL9P15248 144 aa17.12■□□□□ 0.33
CHD3-215ENST00000572750 CYP3A5P20815 502 aa17.12■□□□□ 0.33
CHD3-215ENST00000572750 LRPAP1P30533 357 aa17.12■□□□□ 0.33
CHD3-215ENST00000572750 RPL9P32969 192 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms