RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 VARS2Q5ST30 1063 aaKnown RBP19.8■□□□□ 0.76
CHD3-214ENST00000572579 SLC8B1Q6J4K2 584 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 ZPBP2Q6X784 338 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 HAUS6Q7Z4H7 955 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 GPBP1Q86WP2 473 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 FGF13Q92913 245 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 FGF14Q92915 247 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 SLC38A7Q9NVC3 462 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 KCND2Q9NZV8 630 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 WNT16Q9UBV4 365 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.8■□□□□ 0.76
CHD3-214ENST00000572579 CLIC4Q9Y696 253 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 WDR27A2RRH5 827 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 SEC24AO95486 1093 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 CXCL8P10145 99 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 AOC1P19801 751 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 RPL9P32969 192 aaKnown RBP19.79■□□□□ 0.76
CHD3-214ENST00000572579 NUBP1P53384 320 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 SMTNP53814 917 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 ROR1Q01973 937 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 STRN3Q13033 797 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 UVSSAQ2YD98 709 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 SPECC1Q5M775 1068 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 LIN9Q5TKA1 542 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 FAM173BQ6P4H8 233 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 SLC39A4Q6P5W5 647 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 PDXDC1Q6P996 788 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 ANKS3Q6ZW76 656 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 CDH7Q9ULB5 785 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 TBX20Q9UMR3 447 aa19.79■□□□□ 0.76
CHD3-214ENST00000572579 MTCL1Q9Y4B5 1905 aaKnown RBP19.78■□□□□ 0.76
CHD3-214ENST00000572579 TRIP11Q15643 1979 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 TTC26A0AVF1 554 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 TRAPPC3O43617 180 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 POU2F2P09086 479 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 SRFP11831 508 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 UBA7P41226 1012 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 GUCY2FP51841 1108 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 SLC5A9Q2M3M2 681 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 ZNF461Q8TAF7 563 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 GPR152Q8TDT2 470 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 RAD54LQ92698 747 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 ATOH1Q92858 354 aaPredicted RBP19.78■□□□□ 0.76
CHD3-214ENST00000572579 NXPE3Q969Y0 559 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 EPSTI1Q96J88 318 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 CDK5RAP3Q96JB5 506 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 SUSD3Q96L08 255 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 IKZF4Q9H2S9 585 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 MFSD1Q9H3U5 465 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 UPF2Q9HAU5 1272 aaKnown RBP19.78■□□□□ 0.76
CHD3-214ENST00000572579 FBXL5Q9UKA1 691 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 FBXL21Q9UKT6 434 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 POLIQ9UNA4 740 aa19.78■□□□□ 0.76
CHD3-214ENST00000572579 LACTBL1A8MY62 500 aa19.77■□□□□ 0.76
CHD3-214ENST00000572579 CLDN3O15551 220 aa19.77■□□□□ 0.76
CHD3-214ENST00000572579 SLC26A4O43511 780 aa19.77■□□□□ 0.76
CHD3-214ENST00000572579 GPC5P78333 572 aa19.77■□□□□ 0.76
CHD3-214ENST00000572579 BRAPQ7Z569 592 aa19.77■□□□□ 0.76
CHD3-214ENST00000572579 LARSQ9P2J5 1176 aaKnown RBP19.77■□□□□ 0.76
CHD3-214ENST00000572579 KCNG1Q9UIX4 513 aa19.77■□□□□ 0.76
CHD3-214ENST00000572579 ODF2LQ9ULJ1 636 aa19.77■□□□□ 0.76
CHD3-214ENST00000572579 CA14Q9ULX7 337 aa19.77■□□□□ 0.76
CHD3-214ENST00000572579 CFAP54Q96N23 3096 aa19.77■□□□□ 0.76
CHD3-214ENST00000572579 NOTCH4Q99466 2003 aa19.76■□□□□ 0.75
CHD3-214ENST00000572579 ARHGEF37A1IGU5 675 aa19.76■□□□□ 0.75
CHD3-214ENST00000572579 TISP43B9A030 160 aa19.76■□□□□ 0.75
CHD3-214ENST00000572579 SYN3O14994 580 aa19.76■□□□□ 0.75
CHD3-214ENST00000572579 VNN2O95498 520 aa19.76■□□□□ 0.75
CHD3-214ENST00000572579 PIGRP01833 764 aa19.76■□□□□ 0.75
CHD3-214ENST00000572579 ADRB2P07550 413 aa19.76■□□□□ 0.75
CHD3-214ENST00000572579 CLTAP09496 248 aa19.76■□□□□ 0.75
CHD3-214ENST00000572579 NMT1P30419 496 aaKnown RBP19.76■□□□□ 0.75
CHD3-214ENST00000572579 LONP1P36776 959 aaKnown RBP19.76■□□□□ 0.75
CHD3-214ENST00000572579 RESTQ13127 1097 aa19.76■□□□□ 0.75
CHD3-214ENST00000572579 ENOX2Q16206 610 aaKnown RBP19.76■□□□□ 0.75
CHD3-214ENST00000572579 NPAS3Q8IXF0 933 aa19.76■□□□□ 0.75
CHD3-214ENST00000572579 MYCT1Q8N699 235 aa19.76■□□□□ 0.75
CHD3-214ENST00000572579 CCSER1Q9C0I3 900 aa19.76■□□□□ 0.75
CHD3-214ENST00000572579 FBXO2Q9UK22 296 aaPredicted RBP19.76■□□□□ 0.75
CHD3-214ENST00000572579 A0A0B4J269 797 aa19.75■□□□□ 0.75
CHD3-214ENST00000572579 ANKRD63C9JTQ0 380 aa19.75■□□□□ 0.75
CHD3-214ENST00000572579 PPEF2O14830 753 aa19.75■□□□□ 0.75
CHD3-214ENST00000572579 MARCKSP29966 332 aaPredicted RBP19.75■□□□□ 0.75
CHD3-214ENST00000572579 LRPAP1P30533 357 aa19.75■□□□□ 0.75
CHD3-214ENST00000572579 DDIT3P35638 169 aa19.75■□□□□ 0.75
CHD3-214ENST00000572579 ARPP19P56211 112 aa19.75■□□□□ 0.75
CHD3-214ENST00000572579 ZC2HC1CQ53FD0 456 aaPredicted RBP19.75■□□□□ 0.75
CHD3-214ENST00000572579 ING5Q8WYH8 240 aa19.75■□□□□ 0.75
CHD3-214ENST00000572579 DDX12PQ92771 950 aa19.75■□□□□ 0.75
CHD3-214ENST00000572579 CALML4Q96GE6 196 aa19.75■□□□□ 0.75
CHD3-214ENST00000572579 CLIC6Q96NY7 704 aa19.75■□□□□ 0.75
CHD3-214ENST00000572579 PLEKHA5Q9HAU0 1116 aa19.75■□□□□ 0.75
CHD3-214ENST00000572579 SLC2A4RGQ9NR83 387 aa19.75■□□□□ 0.75
CHD3-214ENST00000572579 TIMM13Q9Y5L4 95 aaPredicted RBP19.75■□□□□ 0.75
CHD3-214ENST00000572579 ZFP37Q9Y6Q3 630 aaPredicted RBP19.75■□□□□ 0.75
CHD3-214ENST00000572579 VPS37CA5D8V6 355 aaPredicted RBP19.74■□□□□ 0.75
CHD3-214ENST00000572579 TRAK2O60296 914 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 XYLBO75191 536 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 RHOP08100 348 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 ATF2P15336 505 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms