RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 KRT37O76014 449 aa21.09■□□□□ 0.97
NUP88-203ENST00000572019 OSTNP61366 133 aa21.09■□□□□ 0.97
NUP88-203ENST00000572019 CORO1BQ9BR76 489 aa21.09■□□□□ 0.97
NUP88-203ENST00000572019 NDRG2Q9UN36 371 aaKnown RBP21.09■□□□□ 0.97
NUP88-203ENST00000572019 MOSPD3O75425 235 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 ABLIM3O94929 683 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 RPA1P27694 616 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 RPS9P46781 194 aaKnown RBP21.08■□□□□ 0.97
NUP88-203ENST00000572019 ARPP19P56211 112 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 ZNF174Q15697 407 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 LPAL2Q16609 132 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 DCAF4L1Q3SXM0 396 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 SLC8B1Q6J4K2 584 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 ALKAL1Q6UXT8 129 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 ANKS3Q6ZW76 656 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 TAS1R3Q7RTX0 852 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 HS6ST3Q8IZP7 471 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 ZNF461Q8TAF7 563 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 ELSPBP1Q96BH3 223 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 CDT1Q9H211 546 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 AVENQ9NQS1 362 aaPredicted RBP21.08■□□□□ 0.97
NUP88-203ENST00000572019 GDE1Q9NZC3 331 aa21.08■□□□□ 0.97
NUP88-203ENST00000572019 GJA1P17302 382 aa21.07■□□□□ 0.96
NUP88-203ENST00000572019 PTPN2P17706 415 aa21.07■□□□□ 0.96
NUP88-203ENST00000572019 ADCY1Q08828 1119 aa21.07■□□□□ 0.96
NUP88-203ENST00000572019 XKR4Q5GH76 650 aa21.07■□□□□ 0.96
NUP88-203ENST00000572019 ZNF852Q6ZMS4 543 aa21.07■□□□□ 0.96
NUP88-203ENST00000572019 C18orf25Q96B23 403 aaPredicted RBP21.07■□□□□ 0.96
NUP88-203ENST00000572019 ANK1P16157 1881 aa21.07■□□□□ 0.96
NUP88-203ENST00000572019 KIF26AQ9ULI4 1882 aaPredicted RBP21.07■□□□□ 0.96
NUP88-203ENST00000572019 MAP1BP46821 2468 aaKnown RBP21.06■□□□□ 0.96
NUP88-203ENST00000572019 DCDC2BA2VCK2 349 aa21.06■□□□□ 0.96
NUP88-203ENST00000572019 HOXC13P31276 330 aa21.06■□□□□ 0.96
NUP88-203ENST00000572019 MAGEA9P43362 315 aa21.06■□□□□ 0.96
NUP88-203ENST00000572019 VITQ6UXI7 678 aa21.06■□□□□ 0.96
NUP88-203ENST00000572019 ASB16Q96NS5 453 aa21.06■□□□□ 0.96
NUP88-203ENST00000572019 BHMT2Q9H2M3 363 aa21.06■□□□□ 0.96
NUP88-203ENST00000572019 CYP4F11Q9HBI6 524 aa21.06■□□□□ 0.96
NUP88-203ENST00000572019 PTPRHQ9HD43 1115 aa21.06■□□□□ 0.96
NUP88-203ENST00000572019 INSL5Q9Y5Q6 135 aa21.06■□□□□ 0.96
NUP88-203ENST00000572019 MYH11P35749 1972 aa21.06■□□□□ 0.96
NUP88-203ENST00000572019 PODXLO00592 558 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 ABLIM1O14639 778 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 PRRG1O14668 218 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 LRG1P02750 347 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 OR52Z1P0C646 297 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 VIPR2P41587 438 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 GRM5P41594 1212 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 MRPL58Q14197 206 aaKnown RBP21.05■□□□□ 0.96
NUP88-203ENST00000572019 GAS6Q14393 721 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 NBR1Q14596 966 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 RTL10Q7L3V2 364 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 DAW1Q8N136 415 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 UROC1Q96N76 676 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 NELL2Q99435 816 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 ACO2Q99798 780 aaKnown RBP21.05■□□□□ 0.96
NUP88-203ENST00000572019 CHRDQ9H2X0 955 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 CEP72Q9P209 647 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 FBXL5Q9UKA1 691 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 TNFSF13BQ9Y275 285 aa21.05■□□□□ 0.96
NUP88-203ENST00000572019 ATF2P15336 505 aa21.04■□□□□ 0.96
NUP88-203ENST00000572019 DMWDQ09019 674 aa21.04■□□□□ 0.96
NUP88-203ENST00000572019 PPP2R5AQ15172 486 aa21.04■□□□□ 0.96
NUP88-203ENST00000572019 WDR44Q5JSH3 913 aa21.04■□□□□ 0.96
NUP88-203ENST00000572019 MAP4K3Q8IVH8 894 aa21.04■□□□□ 0.96
NUP88-203ENST00000572019 TCEAL8Q8IYN2 117 aa21.04■□□□□ 0.96
NUP88-203ENST00000572019 DNASE1L2Q92874 299 aa21.04■□□□□ 0.96
NUP88-203ENST00000572019 RSPRY1Q96DX4 576 aa21.04■□□□□ 0.96
NUP88-203ENST00000572019 TARS2Q9BW92 718 aaKnown RBP21.04■□□□□ 0.96
NUP88-203ENST00000572019 BRD9Q9H8M2 597 aa21.04■□□□□ 0.96
NUP88-203ENST00000572019 ZFP14Q9HCL3 533 aa21.04■□□□□ 0.96
NUP88-203ENST00000572019 USP18Q9UMW8 372 aa21.04■□□□□ 0.96
NUP88-203ENST00000572019 SDK1Q7Z5N4 2213 aa21.03■□□□□ 0.96
NUP88-203ENST00000572019 K7ERI5 159 aa21.03■□□□□ 0.96
NUP88-203ENST00000572019 TRAPPC3O43617 180 aa21.03■□□□□ 0.96
NUP88-203ENST00000572019 VNN2O95498 520 aa21.03■□□□□ 0.96
NUP88-203ENST00000572019 GDI1P31150 447 aa21.03■□□□□ 0.96
NUP88-203ENST00000572019 NPTX2P47972 431 aa21.03■□□□□ 0.96
NUP88-203ENST00000572019 EFNA5P52803 228 aa21.03■□□□□ 0.96
NUP88-203ENST00000572019 ANKRD1Q15327 319 aa21.03■□□□□ 0.96
NUP88-203ENST00000572019 ZNF568Q3ZCX4 644 aa21.03■□□□□ 0.96
NUP88-203ENST00000572019 SEZ6Q53EL9 994 aa21.03■□□□□ 0.96
NUP88-203ENST00000572019 C4orf32Q8N8J7 132 aa21.03■□□□□ 0.96
NUP88-203ENST00000572019 ZBTB45Q96K62 511 aaPredicted RBP21.03■□□□□ 0.96
NUP88-203ENST00000572019 IFT74Q96LB3 600 aa21.03■□□□□ 0.96
NUP88-203ENST00000572019 ZNF334Q9HCZ1 680 aaPredicted RBP21.03■□□□□ 0.96
NUP88-203ENST00000572019 NCAM2O15394 837 aa21.02■□□□□ 0.96
NUP88-203ENST00000572019 ELF1P32519 619 aa21.02■□□□□ 0.96
NUP88-203ENST00000572019 CCT6AP40227 531 aaKnown RBP21.02■□□□□ 0.96
NUP88-203ENST00000572019 PEX3P56589 373 aa21.02■□□□□ 0.96
NUP88-203ENST00000572019 SATB1Q01826 763 aa21.02■□□□□ 0.96
NUP88-203ENST00000572019 SPEM2Q0P670 501 aa21.02■□□□□ 0.96
NUP88-203ENST00000572019 TRIM29Q14134 588 aa21.02■□□□□ 0.96
NUP88-203ENST00000572019 GPIHBP1Q8IV16 184 aa21.02■□□□□ 0.96
NUP88-203ENST00000572019 ERMNQ8TAM6 284 aa21.02■□□□□ 0.96
NUP88-203ENST00000572019 TRMT61BQ9BVS5 477 aaKnown RBP21.02■□□□□ 0.96
NUP88-203ENST00000572019 LMAN1LQ9HAT1 526 aa21.02■□□□□ 0.96
NUP88-203ENST00000572019 C2orf42Q9NWW7 574 aa21.02■□□□□ 0.96
NUP88-203ENST00000572019 CDV3Q9UKY7 258 aaKnown RBP21.02■□□□□ 0.96
NUP88-203ENST00000572019 KIAA1024Q9UPX6 916 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms