RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 ZNFX1Q9P2E3 1918 aaKnown RBP17.86■□□□□ 0.45
LITAF-209ENST00000571688 COL24A1Q17RW2 1714 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 PLSCR1O15162 318 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 FAM13AO94988 1023 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 SGPL1O95470 568 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 GSTT1P30711 240 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 MAGEA4P43358 317 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 VPS41P49754 854 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 EIF6P56537 245 aaKnown RBP17.86■□□□□ 0.45
LITAF-209ENST00000571688 CYP4A11Q02928 519 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 LRRC23Q53EV4 343 aaPredicted RBP17.86■□□□□ 0.45
LITAF-209ENST00000571688 PRR16Q569H4 304 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 HS2ST1Q7LGA3 356 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 SDCCAG8Q86SQ7 713 aaPredicted RBP17.86■□□□□ 0.45
LITAF-209ENST00000571688 KSR1Q8IVT5 923 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 MYCT1Q8N699 235 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 BBOF1Q8ND07 529 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 PPFIBP2Q8ND30 876 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 SYNCQ9H7C4 482 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 KANSL3Q9P2N6 904 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 ZNF212Q9UDV6 495 aa17.86■□□□□ 0.45
LITAF-209ENST00000571688 SLC16A2P36021 539 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 Q4G0T1 1027 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 NOP9Q86U38 636 aaKnown RBP17.85■□□□□ 0.45
LITAF-209ENST00000571688 NBPF5PQ86XG9 351 aaPredicted RBP17.85■□□□□ 0.45
LITAF-209ENST00000571688 CLEC10AQ8IUN9 316 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 ZNF75CPQ92670 426 aaPredicted RBP17.85■□□□□ 0.45
LITAF-209ENST00000571688 LENG9Q96B70 501 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 ZNF653Q96CK0 615 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 NR1H4Q96RI1 486 aaPredicted RBP17.85■□□□□ 0.45
LITAF-209ENST00000571688 SMC6Q96SB8 1091 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 FIZ1Q96SL8 496 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 ZNF184Q99676 751 aaPredicted RBP17.85■□□□□ 0.45
LITAF-209ENST00000571688 UBE2OQ9C0C9 1292 aaKnown RBP17.85■□□□□ 0.45
LITAF-209ENST00000571688 NPHS2Q9NP85 383 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 KRT82Q9NSB4 513 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 DDX43Q9NXZ2 648 aaKnown RBP17.85■□□□□ 0.45
LITAF-209ENST00000571688 TYROBPO43914 113 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 PKN2Q16513 984 aaKnown RBP17.85■□□□□ 0.45
LITAF-209ENST00000571688 FYB2Q5VWT5 728 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 IZUMO3Q5VZ72 239 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 CYP4F22Q6NT55 531 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 KBTBD2Q8IY47 623 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 ARHGAP18Q8N392 663 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 MARCH10Q8NA82 808 aaPredicted RBP17.85■□□□□ 0.45
LITAF-209ENST00000571688 CFAP57Q96MR6 1250 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 TUBB6Q9BUF5 446 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 POLR3CQ9BUI4 534 aaPredicted RBP17.85■□□□□ 0.45
LITAF-209ENST00000571688 ARL8BQ9NVJ2 186 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 GSTTP1A0A1W2PQM5 241 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 MAP3K7O43318 606 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 CA4P22748 312 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 RANBP1P43487 201 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 ARHGAP4P98171 946 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 ARMC3Q5W041 872 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 C4orf33Q8N1A6 199 aa17.85■□□□□ 0.45
LITAF-209ENST00000571688 R3HDM2Q9Y2K5 976 aaKnown RBP17.85■□□□□ 0.45
LITAF-209ENST00000571688 LOC102724428A0A0B4J2F2 783 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 AKR1B1P15121 316 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 SIK1P57059 783 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 WDR72Q3MJ13 1102 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 HHATQ5VTY9 493 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 NSMFQ6X4W1 530 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 ZCCHC9Q8N567 271 aaKnown RBP17.84■□□□□ 0.45
LITAF-209ENST00000571688 RBM15Q96T37 977 aaKnown RBP eCLIP17.84■□□□□ 0.45
LITAF-209ENST00000571688 MMADHCQ9H3L0 296 aaPredicted RBP17.84■□□□□ 0.45
LITAF-209ENST00000571688 LMCD1Q9NZU5 365 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 SLC4A7Q9Y6M7 1214 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 FMO1Q01740 532 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 CENPCQ03188 943 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 CERKLQ49MI3 558 aaPredicted RBP17.84■□□□□ 0.45
LITAF-209ENST00000571688 FOCADQ5VW36 1801 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 LARGE2Q8N3Y3 721 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 WDR60Q8WVS4 1066 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 CCDC28BQ9BUN5 200 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 FOXP3Q9BZS1 431 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 VAV3Q9UKW4 847 aa17.84■□□□□ 0.45
LITAF-209ENST00000571688 EMSYQ7Z589 1322 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 HAUS5O94927 633 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 TROVE2P10155 538 aaKnown RBP eCLIP17.83■□□□□ 0.44
LITAF-209ENST00000571688 KRT15P19012 456 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 RHBDL3P58872 404 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 CNPY1Q3B7I2 92 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 EPC2Q52LR7 807 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 GPATCH4Q5T3I0 446 aaKnown RBP17.83■□□□□ 0.44
LITAF-209ENST00000571688 CEP128Q6ZU80 1094 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 C1orf186Q6ZWK4 172 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 ZNF720Q7Z2F6 126 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 CCDC89Q8N998 374 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 DTX3LQ8TDB6 740 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 SLC5A5Q92911 643 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 P2RX7Q99572 595 aaKnown RBP17.83■□□□□ 0.44
LITAF-209ENST00000571688 EIF2AK1Q9BQI3 630 aaKnown RBP17.83■□□□□ 0.44
LITAF-209ENST00000571688 PARVGQ9HBI0 331 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 ANKFY1Q9P2R3 1169 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 SH3BP1Q9Y3L3 701 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 GYG2O15488 501 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 LYNP07948 512 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 AP3B2Q13367 1082 aa17.83■□□□□ 0.44
LITAF-209ENST00000571688 LVRNQ6Q4G3 990 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms