RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 AXDND1Q5T1B0 1012 aaPredicted RBP10.63□□□□□ -0.71
CIITA-207ENST00000571545 SLC8B1Q6J4K2 584 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 ZNF280DQ6N043 979 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 SPATA31D4Q6ZUB0 917 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 HAUS6Q7Z4H7 955 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 CD302Q8IX05 232 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 CEP120Q8N960 986 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 KRI1Q8N9T8 703 aaKnown RBP10.63□□□□□ -0.71
CIITA-207ENST00000571545 PRSS33Q8NF86 280 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 ZNF461Q8TAF7 563 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 LARP4BQ92615 738 aaKnown RBP10.63□□□□□ -0.71
CIITA-207ENST00000571545 INTS4Q96HW7 963 aaKnown RBP10.63□□□□□ -0.71
CIITA-207ENST00000571545 PHF12Q96QT6 1004 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 REEP2Q9BRK0 252 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 CCSER1Q9C0I3 900 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 POLD4Q9HCU8 107 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 CACNG4Q9UBN1 327 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 CDH7Q9ULB5 785 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 USP20Q9Y2K6 914 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 CDY1Q9Y6F8 540 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 SFI1A8K8P3 1242 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 ABLIM1O14639 778 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 PRRG1O14668 218 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 TRAK2O60296 914 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 PIGRP01833 764 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 LRG1P02750 347 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 PDIA4P13667 645 aaKnown RBP10.62□□□□□ -0.71
CIITA-207ENST00000571545 PLCG1P19174 1290 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 CYP3A5P20815 502 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 TKTP29401 623 aaKnown RBP10.62□□□□□ -0.71
CIITA-207ENST00000571545 TPGS2Q68CL5 300 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 ALYREFQ86V81 257 aaKnown RBP10.62□□□□□ -0.71
CIITA-207ENST00000571545 ELMOD1Q8N336 334 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 MYCT1Q8N699 235 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 RAD54LQ92698 747 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 HVCN1Q96D96 273 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 SUSD3Q96L08 255 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 PLIN2Q99541 437 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 GOLGA2P5Q9HBQ8 144 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 SEL1LQ9UBV2 794 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 TBX20Q9UMR3 447 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 UBQLN1Q9UMX0 589 aaKnown RBP10.62□□□□□ -0.71
CIITA-207ENST00000571545 POLIQ9UNA4 740 aa10.62□□□□□ -0.71
CIITA-207ENST00000571545 MORC2Q9Y6X9 1032 aaPredicted RBP10.62□□□□□ -0.71
CIITA-207ENST00000571545 ANHXE9PGG2 379 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 ZNF197O14709 1029 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 OGTO15294 1046 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 N4BP1O75113 896 aaKnown RBP10.61□□□□□ -0.71
CIITA-207ENST00000571545 ATF2P15336 505 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 AOC1P19801 751 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 MARCKSP29966 332 aaPredicted RBP10.61□□□□□ -0.71
CIITA-207ENST00000571545 LRPAP1P30533 357 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 PFKPQ01813 784 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 POU5F1Q01860 360 aaKnown RBP10.61□□□□□ -0.71
CIITA-207ENST00000571545 SOX4Q06945 474 aaPredicted RBP10.61□□□□□ -0.71
CIITA-207ENST00000571545 TCF15Q12870 199 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 HTR4Q13639 388 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 KARSQ15046 597 aaKnown RBP10.61□□□□□ -0.71
CIITA-207ENST00000571545 PABPC1LQ4VXU2 614 aaKnown RBP10.61□□□□□ -0.71
CIITA-207ENST00000571545 VARS2Q5ST30 1063 aaKnown RBP10.61□□□□□ -0.71
CIITA-207ENST00000571545 IER5LQ5T953 404 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 SLFN12LQ6IEE8 588 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 GRASPQ7Z6J2 395 aaPredicted RBP10.61□□□□□ -0.71
CIITA-207ENST00000571545 SIX5Q8N196 739 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 SLC44A3Q8N4M1 653 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 LEMD2Q8NC56 503 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 C3orf58Q8NDZ4 430 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 FLCNQ8NFG4 579 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 ATOH1Q92858 354 aaPredicted RBP10.61□□□□□ -0.71
CIITA-207ENST00000571545 KIF12Q96FN5 646 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 SHDQ96IW2 340 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 MYADMQ96S97 322 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 ST6GALNAC4Q9H4F1 302 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 ZHX3Q9H4I2 956 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 ZSCAN16Q9H4T2 348 aaPredicted RBP10.61□□□□□ -0.71
CIITA-207ENST00000571545 RPF1Q9H9Y2 349 aaKnown RBP10.61□□□□□ -0.71
CIITA-207ENST00000571545 AVENQ9NQS1 362 aaPredicted RBP10.61□□□□□ -0.71
CIITA-207ENST00000571545 SLC2A4RGQ9NR83 387 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 GDE1Q9NZC3 331 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 CACNA1HO95180 2353 aa10.61□□□□□ -0.71
CIITA-207ENST00000571545 TTC26A0AVF1 554 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 CCL16O15467 120 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 PDGFBP01127 241 aaPredicted RBP10.6□□□□□ -0.71
CIITA-207ENST00000571545 CXCL8P10145 99 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 MYBP10242 640 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 DDIT3P35638 169 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 BRCC3P46736 316 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 ROR1Q01973 937 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 YWHAHQ04917 246 aaPredicted RBP10.6□□□□□ -0.71
CIITA-207ENST00000571545 PLD1Q13393 1074 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 ALCAMQ13740 583 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 MCM6Q14566 821 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 SLC10A6Q3KNW5 377 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 CTXN3Q4LDR2 81 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 ARSHQ5FYA8 562 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 IQCEQ6IPM2 695 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 PHLDB3Q6NSJ2 640 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 CCDC73Q6ZRK6 1079 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 USP37Q86T82 979 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 MAP4K3Q8IVH8 894 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms