RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 VARS2Q5ST30 1063 aaKnown RBP12.41□□□□□ -0.42
LITAF-206ENST00000571277 BRAPQ7Z569 592 aa12.41□□□□□ -0.42
LITAF-206ENST00000571277 TMEM130Q8N3G9 435 aa12.41□□□□□ -0.42
LITAF-206ENST00000571277 FLCNQ8NFG4 579 aa12.41□□□□□ -0.42
LITAF-206ENST00000571277 ST13P5Q8NFI4 369 aaPredicted RBP12.41□□□□□ -0.42
LITAF-206ENST00000571277 ITFG1Q8TB96 612 aa12.41□□□□□ -0.42
LITAF-206ENST00000571277 FGF14Q92915 247 aa12.41□□□□□ -0.42
LITAF-206ENST00000571277 CDK5RAP3Q96JB5 506 aa12.41□□□□□ -0.42
LITAF-206ENST00000571277 REEP2Q9BRK0 252 aa12.41□□□□□ -0.42
LITAF-206ENST00000571277 RPP25Q9BUL9 199 aaKnown RBP12.41□□□□□ -0.42
LITAF-206ENST00000571277 HCFC1R1Q9NWW0 138 aa12.41□□□□□ -0.42
LITAF-206ENST00000571277 ANKFY1Q9P2R3 1169 aa12.41□□□□□ -0.42
LITAF-206ENST00000571277 KCNG1Q9UIX4 513 aa12.41□□□□□ -0.42
LITAF-206ENST00000571277 FBXL21Q9UKT6 434 aa12.41□□□□□ -0.42
LITAF-206ENST00000571277 CDH7Q9ULB5 785 aa12.41□□□□□ -0.42
LITAF-206ENST00000571277 ODF2LQ9ULJ1 636 aa12.41□□□□□ -0.42
LITAF-206ENST00000571277 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.41□□□□□ -0.42
LITAF-206ENST00000571277 NUMBLQ9Y6R0 609 aa12.41□□□□□ -0.42
LITAF-206ENST00000571277 RIF1Q5UIP0 2472 aaKnown RBP12.4□□□□□ -0.42
LITAF-206ENST00000571277 TTC26A0AVF1 554 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 WDR27A2RRH5 827 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 PROB1E7EW31 1015 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 CLDN3O15551 220 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 HARSP12081 509 aaKnown RBP12.4□□□□□ -0.42
LITAF-206ENST00000571277 RPL9P32969 192 aaKnown RBP12.4□□□□□ -0.42
LITAF-206ENST00000571277 ZNF131P52739 623 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 ROR1Q01973 937 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 ZBTB6Q15916 424 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 POTEHQ6S545 545 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 PARM1Q6UWI2 310 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 RTL10Q7L3V2 364 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 HAUS6Q7Z4H7 955 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 ZNF461Q8TAF7 563 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 GPR152Q8TDT2 470 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 ATOH1Q92858 354 aaPredicted RBP12.4□□□□□ -0.42
LITAF-206ENST00000571277 FGF13Q92913 245 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 SUSD3Q96L08 255 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 FIZ1Q96SL8 496 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 IRF2BPLQ9H1B7 796 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 LARSQ9P2J5 1176 aaKnown RBP12.4□□□□□ -0.42
LITAF-206ENST00000571277 DNMT3BQ9UBC3 853 aaKnown RBP12.4□□□□□ -0.42
LITAF-206ENST00000571277 TUBGCP4Q9UGJ1 667 aa12.4□□□□□ -0.42
LITAF-206ENST00000571277 ZFP37Q9Y6Q3 630 aaPredicted RBP12.4□□□□□ -0.42
LITAF-206ENST00000571277 DMDP11532 3685 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 ARHGEF37A1IGU5 675 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 SYN3O14994 580 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 XYLBO75191 536 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 BMP15O95972 392 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 PIGRP01833 764 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 CXCL8P10145 99 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 PLCG1P19174 1290 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 LONP1P36776 959 aaKnown RBP12.39□□□□□ -0.43
LITAF-206ENST00000571277 UBA7P41226 1012 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 TNFSF9P41273 254 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 KARSQ15046 597 aaKnown RBP12.39□□□□□ -0.43
LITAF-206ENST00000571277 SF3A1Q15459 793 aaKnown RBP12.39□□□□□ -0.43
LITAF-206ENST00000571277 SLC39A4Q6P5W5 647 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 GPBP1Q86WP2 473 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 NPAS3Q8IXF0 933 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 CCDC105Q8IYK2 499 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 PLEKHA5Q9HAU0 1116 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 SLC2A4RGQ9NR83 387 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 FBXL5Q9UKA1 691 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 CA14Q9ULX7 337 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 TBX20Q9UMR3 447 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 POLIQ9UNA4 740 aa12.39□□□□□ -0.43
LITAF-206ENST00000571277 COL4A3Q01955 1670 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 VPS13AQ96RL7 3174 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 H0YCG3 227 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 SEC24AO95486 1093 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 ADRB2P07550 413 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 CLTAP09496 248 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 ATF2P15336 505 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 NBL1P41271 181 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 SPAG1Q07617 926 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 MCM6Q14566 821 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 PTPAQ15257 358 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 SLC5A9Q2M3M2 681 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 PABPC1LQ4VXU2 614 aaKnown RBP12.38□□□□□ -0.43
LITAF-206ENST00000571277 ZBTB41Q5SVQ8 909 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 USP49Q70CQ1 688 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 TCEAL8Q8IYN2 117 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 RAD54LQ92698 747 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 CALML4Q96GE6 196 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 RTP3Q9BQQ7 232 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 TBC1D17Q9HA65 648 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 KCNH3Q9ULD8 1083 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 NUB1Q9Y5A7 615 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 ANK1P16157 1881 aa12.38□□□□□ -0.43
LITAF-206ENST00000571277 FAM186AA6NE01 2351 aa12.37□□□□□ -0.43
LITAF-206ENST00000571277 GVINP1Q7Z2Y8 2422 aa12.37□□□□□ -0.43
LITAF-206ENST00000571277 A0A0B4J269 797 aa12.37□□□□□ -0.43
LITAF-206ENST00000571277 M0QZQ0 153 aa12.37□□□□□ -0.43
LITAF-206ENST00000571277 NRG2O14511 850 aaPredicted RBP12.37□□□□□ -0.43
LITAF-206ENST00000571277 HNRNPDLO14979 420 aaKnown RBP12.37□□□□□ -0.43
LITAF-206ENST00000571277 RHOP08100 348 aa12.37□□□□□ -0.43
LITAF-206ENST00000571277 SCP2P22307 547 aa12.37□□□□□ -0.43
LITAF-206ENST00000571277 LRPAP1P30533 357 aa12.37□□□□□ -0.43
LITAF-206ENST00000571277 AARSP49588 968 aaKnown RBP eCLIP12.37□□□□□ -0.43
LITAF-206ENST00000571277 GPC5P78333 572 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms