RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CLEC17AQ6ZS10 378 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 TMEM161BQ8NDZ6 487 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 PJA1Q8NG27 643 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 ATRIPQ8WXE1 791 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 SMG7Q92540 1137 aaKnown RBP14.55□□□□□ -0.08
CCDC40-205ENST00000571028 BICD1Q96G01 975 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 BORCS6Q96GS4 357 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 CCDC34Q96HJ3 373 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 TARS2Q9BW92 718 aaKnown RBP14.55□□□□□ -0.08
CCDC40-205ENST00000571028 APOL6Q9BWW8 343 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 NFKBIZQ9BYH8 718 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 BCO2Q9BYV7 579 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 CCDC113Q9H0I3 377 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 FZD8Q9H461 694 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 LMBRD1Q9NUN5 540 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 AGPAT5Q9NUQ2 364 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 EXOC1Q9NV70 894 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 SPATA6Q9NWH7 488 aaPredicted RBP14.55□□□□□ -0.08
CCDC40-205ENST00000571028 ARHGAP28Q9P2N2 729 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 DNAJB4Q9UDY4 337 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 KCNG1Q9UIX4 513 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 SSX2IPQ9Y2D8 614 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 DENND4AQ7Z401 1863 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 PRR5-ARHGAP8B1AHC4 643 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 TULP1O00294 542 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-205ENST00000571028 INPPL1O15357 1258 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 NPTXRO95502 500 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 EDN1P05305 212 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 MYBP10242 640 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 MAPTP10636 758 aaKnown RBP14.54□□□□□ -0.08
CCDC40-205ENST00000571028 HOXA11P31270 313 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-205ENST00000571028 MATR3P43243 847 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCDC40-205ENST00000571028 RAB27AP51159 221 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 NCKAP1LP55160 1127 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 ARHGAP8P85298 464 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 KMT5BQ4FZB7 885 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 UNC13DQ70J99 1090 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 GET4Q7L5D6 327 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-205ENST00000571028 TAS1R3Q7RTX0 852 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 SUMF1Q8NBK3 374 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 PGBD4Q96DM1 585 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 MYADMQ96S97 322 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 NTPCRQ9BSD7 190 aaKnown RBP14.54□□□□□ -0.08
CCDC40-205ENST00000571028 TCHPQ9BT92 498 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 EIF2AQ9BY44 585 aaKnown RBP14.54□□□□□ -0.08
CCDC40-205ENST00000571028 FGFBP2Q9BYJ0 223 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 FOXQ1Q9C009 403 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 TRIM6Q9C030 488 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-205ENST00000571028 TMEM134Q9H6X4 195 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCDC40-205ENST00000571028 USP18Q9UMW8 372 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 PHLPP2Q6ZVD8 1323 aa14.54□□□□□ -0.08
CCDC40-205ENST00000571028 H0YCG3 227 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 ACKR2O00590 384 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 PRPF6O94906 941 aaKnown RBP14.53□□□□□ -0.08
CCDC40-205ENST00000571028 RPN1P04843 607 aaKnown RBP14.53□□□□□ -0.08
CCDC40-205ENST00000571028 ALDH2P05091 517 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 AXLP30530 894 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 CASP5P51878 434 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 ATXN1P54253 815 aaKnown RBP14.53□□□□□ -0.08
CCDC40-205ENST00000571028 POSTNQ15063 836 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 CAMK4Q16566 473 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 FAM26FQ5R3K3 315 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 NT5DC1Q5TFE4 455 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 ATF7IP2Q5U623 682 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 EEF1DP3Q658K8 133 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 NOTUMQ6P988 496 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 ZNF720Q7Z2F6 126 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 GLIS3Q8NEA6 775 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 CCDC47Q96A33 483 aaKnown RBP14.53□□□□□ -0.08
CCDC40-205ENST00000571028 FIZ1Q96SL8 496 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 VN1R3Q9BXE9 311 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 MRPL4Q9BYD3 311 aaKnown RBP14.53□□□□□ -0.08
CCDC40-205ENST00000571028 SLC39A2Q9NP94 309 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 FAM105AQ9NUU6 356 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 DLGAP2Q9P1A6 1054 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 SEL1LQ9UBV2 794 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 TBX20Q9UMR3 447 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 FAN1Q9Y2M0 1017 aa14.53□□□□□ -0.08
CCDC40-205ENST00000571028 PVALEFA0A1B0GWK0 134 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 KLRC4O43908 158 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 OFD1O75665 1012 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 RFPL2O75678 378 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 LIG4P49917 911 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 DPYDQ12882 1025 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 FAM187BQ17R55 369 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 ZNF528Q3MIS6 628 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 UBXN11Q5T124 520 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 ISM2Q6H9L7 571 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 NELFCDQ8IXH7 590 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 SYCP3Q8IZU3 236 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 ZBTB45Q96K62 511 aaPredicted RBP14.52□□□□□ -0.09
CCDC40-205ENST00000571028 PRIMPOLQ96LW4 560 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 TRAIPQ9BWF2 469 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 RHOBTB2Q9BYZ6 727 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 IKZF4Q9H2S9 585 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 PDZD7Q9H5P4 517 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 SLC2A4RGQ9NR83 387 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 ANKFY1Q9P2R3 1169 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms