RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 C9orf72Q96LT7 481 aa16.38■□□□□ 0.21
SMG6-207ENST00000570756 PCDHB18PQ96TA0 734 aa16.38■□□□□ 0.21
SMG6-207ENST00000570756 EIF2AK1Q9BQI3 630 aaKnown RBP16.38■□□□□ 0.21
SMG6-207ENST00000570756 DCLK3Q9C098 648 aa16.38■□□□□ 0.21
SMG6-207ENST00000570756 PDP2Q9P2J9 529 aa16.38■□□□□ 0.21
SMG6-207ENST00000570756 RGL2O15211 777 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 ATP9AO75110 1047 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 MYBL1P10243 752 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 KCNA3P22001 575 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 MYBPC2Q14324 1141 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 RCN1Q15293 331 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 HHATQ5VTY9 493 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 KCTD1Q719H9 257 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 ZNF720Q7Z2F6 126 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 ZC3H18Q86VM9 953 aaKnown RBP16.37■□□□□ 0.21
SMG6-207ENST00000570756 SCG3Q8WXD2 468 aaKnown RBP16.37■□□□□ 0.21
SMG6-207ENST00000570756 ATG4AQ8WYN0 398 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 DTNBP1Q96EV8 351 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 TTC25Q96NG3 672 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 TIPINQ9BVW5 301 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 COL5A3P25940 1745 aaPredicted RBP16.37■□□□□ 0.21
SMG6-207ENST00000570756 TAF1LQ8IZX4 1826 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 GNPATO15228 680 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 RNF8O76064 485 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 TROVE2P10155 538 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMG6-207ENST00000570756 KRT15P19012 456 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 SLC34A1Q06495 639 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 QRICH1Q2TAL8 776 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 CLNKQ7Z7G1 428 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 NBPF5PQ86XG9 351 aaPredicted RBP16.37■□□□□ 0.21
SMG6-207ENST00000570756 CPNE8Q86YQ8 564 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 ARHGEF19Q8IW93 802 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 STMN2Q93045 179 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 LENG9Q96B70 501 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 PPP1R12CQ9BZL4 782 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 NOCTQ9UK39 431 aaKnown RBP16.37■□□□□ 0.21
SMG6-207ENST00000570756 VAV3Q9UKW4 847 aa16.37■□□□□ 0.21
SMG6-207ENST00000570756 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMG6-207ENST00000570756 CA4P22748 312 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 MAGEA4P43358 317 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 VPS41P49754 854 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 CACNA2D1P54289 1103 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 LLGL1Q15334 1064 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 RBM26Q5T8P6 1007 aaKnown RBP16.36■□□□□ 0.21
SMG6-207ENST00000570756 IZUMO3Q5VZ72 239 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 LRRC74BQ6ZQY2 392 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 C1orf186Q6ZWK4 172 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 NOP9Q86U38 636 aaKnown RBP16.36■□□□□ 0.21
SMG6-207ENST00000570756 CLEC10AQ8IUN9 316 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 KIAA0825Q8IV33 1275 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 SYCP3Q8IZU3 236 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 FAM163AQ96GL9 167 aaPredicted RBP16.36■□□□□ 0.21
SMG6-207ENST00000570756 FAM210AQ96ND0 272 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 RBM15Q96T37 977 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMG6-207ENST00000570756 BTBD10Q9BSF8 475 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 EMSYQ7Z589 1322 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 UTRNP46939 3433 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 SGPL1O95470 568 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 RRM1P23921 792 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 KPNB1Q14974 876 aaKnown RBP16.36■□□□□ 0.21
SMG6-207ENST00000570756 GSTA3Q16772 222 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 CYP4F22Q6NT55 531 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 ILDR2Q71H61 639 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 ZCCHC9Q8N567 271 aaKnown RBP16.36■□□□□ 0.21
SMG6-207ENST00000570756 PWWP2AQ96N64 755 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 GBP5Q96PP8 586 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 SYNCQ9H7C4 482 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 PPCSQ9HAB8 311 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 CYLDQ9NQC7 956 aa16.36■□□□□ 0.21
SMG6-207ENST00000570756 MEIS2O14770 477 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 MAP3K7O43318 606 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 TJP3O95049 919 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 FOSP01100 380 aaPredicted RBP16.35■□□□□ 0.21
SMG6-207ENST00000570756 GABPAQ06546 454 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 RASA3Q14644 834 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 OTOAQ7RTW8 1153 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 ARHGAP22Q7Z5H3 698 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 MTDHQ86UE4 582 aaKnown RBP16.35■□□□□ 0.21
SMG6-207ENST00000570756 KSR1Q8IVT5 923 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 FAM71AQ8IYT1 594 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 ARHGAP18Q8N392 663 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 LARGE2Q8N3Y3 721 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 ITFG2Q969R8 447 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 MCUR1Q96AQ8 359 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 MIPEPQ99797 713 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 CADM1Q9BY67 442 aaKnown RBP16.35■□□□□ 0.21
SMG6-207ENST00000570756 KIAA1586Q9HCI6 787 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 TUFT1Q9NNX1 390 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 ANKFY1Q9P2R3 1169 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 FAM86B1E9PN63 330 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 CAPN9O14815 690 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 MSH4O15457 936 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 FAM86B2P0C5J1 330 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 RPA3P35244 121 aaPredicted RBP16.35■□□□□ 0.21
SMG6-207ENST00000570756 AP1B1Q10567 949 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 RFWD3Q6PCD5 774 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 RDH13Q8NBN7 331 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 EZH1Q92800 747 aaPredicted RBP16.35■□□□□ 0.21
SMG6-207ENST00000570756 SETDB2Q96T68 719 aa16.35■□□□□ 0.21
SMG6-207ENST00000570756 LARSQ9P2J5 1176 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms