RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 VPS16Q9H269 839 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 RSAD1Q9HA92 442 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 UBN1Q9NPG3 1134 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 SNTG2Q9NY99 539 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 IFNKQ9P0W0 207 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 LIMA1Q9UHB6 759 aaKnown RBP7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 CPSF3Q9UKF6 684 aaKnown RBP7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 ZMYND8Q9ULU4 1186 aaPredicted RBP7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 HES2Q9Y543 173 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 A0A0U1RQF3 1178 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 ABHD14A-ACY1A0A1B0GW23 586 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 FSD2A1L4K1 749 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 LRRIQ3A6PVS8 624 aaPredicted RBP7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 MGEA5O60502 916 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 ADH1BP00325 375 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 TPM1P09493 284 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 SYN1P17600 705 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 AKAP5P24588 427 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 GTF2H1P32780 548 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 MLH1P40692 756 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 UBXN1Q04323 297 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 ENPEPQ07075 957 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 TRPC3Q13507 836 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 DSC3Q14574 896 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 ENOX2Q16206 610 aaKnown RBP7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 VWA3BQ502W6 1294 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 ZBTB41Q5SVQ8 909 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 UBXN11Q5T124 520 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 ECHDC2Q86YB7 292 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 NT5DC4Q86YG4 428 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 NPAS4Q8IUM7 802 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 TRIM59Q8IWR1 403 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 DRC7Q8IY82 874 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 ZSWIM2Q8NEG5 633 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 BEST2Q8NFU1 509 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 CACTINQ8WUQ7 758 aaKnown RBP7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 RSPH1Q8WYR4 309 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 BADQ92934 168 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 SLC35C1Q96A29 364 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 MFSD14AQ96MC6 490 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 TSPAN18Q96SJ8 248 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 TRAIPQ9BWF2 469 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 MRPL9Q9BYD2 267 aaKnown RBP7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 MTMR12Q9C0I1 747 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 HAPLN2Q9GZV7 340 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 TMX1Q9H3N1 280 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 NDST4Q9H3R1 872 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 ASB7Q9H672 318 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 PLEKHA5Q9HAU0 1116 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 TMEM8AQ9HCN3 771 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 PDE11AQ9HCR9 933 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 IL23AQ9NPF7 189 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 RGS18Q9NS28 235 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 SLC38A7Q9NVC3 462 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 TMEM161AQ9NX61 479 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 GCNT4Q9P109 453 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 INPP5FQ9Y2H2 1132 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 GIT1Q9Y2X7 761 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 C2CD2Q9Y426 696 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 PCDHB7Q9Y5E2 793 aa7.12□□□□□ -1.27
CTDNEP1-204ENST00000570484 A0A1B0GTH6 734 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 LACTBL1A8MY62 500 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 P4HA2O15460 535 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 FAM189A1O60320 539 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 DXOO77932 396 aaKnown RBP7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 EOMESO95936 686 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 NFICP08651 508 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 KRT19P08727 400 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 ATF7P17544 494 aaPredicted RBP7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 TRIM21P19474 475 aaKnown RBP7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 GCLMP48507 274 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 FMO5P49326 533 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 RNASELQ05823 741 aaKnown RBP7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 KCNH2Q12809 1159 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 GRIK3Q13003 919 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 TRIM14Q14142 442 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 EXOC3L4Q17RC7 722 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 GLRA4Q5JXX5 417 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 LMBRD2Q68DH5 695 aaPredicted RBP7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 KRT39Q6A163 491 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 JADE1Q6IE81 842 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 LYPD8Q6UX82 237 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 CRELD2Q6UXH1 353 aaPredicted RBP7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 IRF2BP1Q8IU81 584 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 TMEM192Q8IY95 271 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 LRRC43Q8N309 656 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 SMG8Q8ND04 991 aaKnown RBP7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 FBXL13Q8NEE6 735 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 PARD3BQ8TEW8 1205 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 LINC01599Q8WXQ3 324 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 LPPQ93052 612 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 ZNF560Q96MR9 790 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 FAM193BQ96PV7 902 aaPredicted RBP7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 OSBPL7Q9BZF2 842 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 XPO4Q9C0E2 1151 aaKnown RBP7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 HSD3B7Q9H2F3 369 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 ELAC1Q9H777 363 aaKnown RBP7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 KLK14Q9P0G3 267 aa7.11□□□□□ -1.27
CTDNEP1-204ENST00000570484 CNTN3Q9P232 1028 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms