RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 SCNM1Q9BWG6 230 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 NAP1L2Q9ULW6 460 aaPredicted RBP11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 PCDHGA5Q9Y5G8 931 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 ASCC3Q8N3C0 2202 aaKnown RBP11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 PCNX2A6NKB5 2137 aa11.57□□□□□ -0.56
CTDNEP1-202ENST00000570380 SMG1Q96Q15 3661 aaKnown RBP11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 THADAQ6YHU6 1953 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 ABCA7Q8IZY2 2146 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 CCDC196A0A1B0GTZ2 297 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 C4orf47A7E2U8 309 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 HEPACAM2A8MVW5 462 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 I3L4J1 428 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 TAF4O00268 1085 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 PRRG1O14668 218 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 EXTL3O43909 919 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 ABLIM3O94929 683 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 GJA1P17302 382 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 TKTP29401 623 aaKnown RBP11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 KPNA1P52294 538 aaPredicted RBP11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 TFDP1Q14186 410 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 ITPR1Q14643 2758 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 C1orf228Q6PIY5 440 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 PDZD4Q76G19 769 aaPredicted RBP11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 OTUD6AQ7L8S5 288 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 HS6ST3Q8IZP7 471 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 ZSCAN18Q8TBC5 510 aaPredicted RBP11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 CSGALNACT1Q8TDX6 532 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 ZCCHC14Q8WYQ9 949 aaKnown RBP11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 LXNQ9BS40 222 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 NFKBIZQ9BYH8 718 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 SLKQ9H2G2 1235 aaPredicted RBP11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 C8orf33Q9H7E9 229 aaPredicted RBP11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 TRPV4Q9HBA0 871 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 VPS45Q9NRW7 570 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 SNTG2Q9NY99 539 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 RGL1Q9NZL6 768 aa11.56□□□□□ -0.56
CTDNEP1-202ENST00000570380 MYBPHLA2RUH7 354 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 SPECC1L-ADORA2AF8WAN1 911 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 TMEM189-UBE2V1I3L0A0 370 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 SLC37A4O43826 429 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 RECQL4O94761 1208 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 SEC24AO95486 1093 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 GLRA2P23416 452 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 ELF1P32519 619 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 CTHP32929 405 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 ARL2P36404 184 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 CCINQ13939 588 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 PON2Q15165 354 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 NTRK3Q16288 839 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 ADCK5Q3MIX3 580 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 CYP4A22Q5TCH4 519 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 SH3PXD2AQ5TCZ1 1133 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 SLC8B1Q6J4K2 584 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 MOXD1Q6UVY6 613 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 ANKS3Q6ZW76 656 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 TCEAL8Q8IYN2 117 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 ZC3H10Q96K80 434 aaKnown RBP11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 ESYT1Q9BSJ8 1104 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 EDEM2Q9BV94 578 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 CYP4F11Q9HBI6 524 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 DDX25Q9UHL0 483 aaKnown RBP11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 MYO16Q9Y6X6 1858 aa11.55□□□□□ -0.56
CTDNEP1-202ENST00000570380 CCDC163A0A0D9SF12 145 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 TTLL13PA6NNM8 815 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 CHADO15335 359 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 B3GAT3O94766 335 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 CCDC192P0DO97 292 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 ATF2P15336 505 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 BRCC3P46736 316 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 CLCNKBP51801 687 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 AKAP17AQ02040 695 aaKnown RBP11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 CTTNQ14247 550 aaKnown RBP11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 EPHA7Q15375 998 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 PKN3Q6P5Z2 889 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 RALGPS2Q86X27 583 aaPredicted RBP11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 RASEFQ8IZ41 740 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 C3orf58Q8NDZ4 430 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 TTC8Q8TAM2 541 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 DYDC2Q96IM9 177 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 C22orf23Q9BZE7 217 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 KCNMB3Q9NPA1 279 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 GTSE1Q9NYZ3 720 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 CEP72Q9P209 647 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 PCDHA4Q9UN74 947 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 INSL5Q9Y5Q6 135 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 NID2Q14112 1375 aa11.54□□□□□ -0.56
CTDNEP1-202ENST00000570380 KIAA1549LQ6ZVL6 1849 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 M0R2N6 131 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 TBX3O15119 743 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 AKAP3O75969 853 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 MYL4P12829 197 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 CEACAM1P13688 526 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 RBM25P49756 843 aaKnown RBP11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 EPHA5P54756 1037 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 ARPP19P56211 112 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 NLRP5P59047 1200 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 FCHO2Q0JRZ9 810 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 TEAD2Q15562 447 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 UPP1Q16831 310 aa11.53□□□□□ -0.56
CTDNEP1-202ENST00000570380 PLK5Q496M5 336 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms