RNA–Protein interactions for RNA: ENST00000570296.1

CLK3-227, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-227ENST00000570296 NPTXRO95502 500 aa20.04■□□□□ 0.8
CLK3-227ENST00000570296 CAVIN2O95810 425 aa20.04■□□□□ 0.8
CLK3-227ENST00000570296 QARSP47897 775 aaKnown RBP20.04■□□□□ 0.8
CLK3-227ENST00000570296 MBTD1Q05BQ5 628 aa20.04■□□□□ 0.8
CLK3-227ENST00000570296 POU5F1BQ06416 359 aa20.04■□□□□ 0.8
CLK3-227ENST00000570296 FCHO2Q0JRZ9 810 aa20.04■□□□□ 0.8
CLK3-227ENST00000570296 EMC2Q15006 297 aa20.04■□□□□ 0.8
CLK3-227ENST00000570296 ELF2Q15723 593 aa20.04■□□□□ 0.8
CLK3-227ENST00000570296 LEMD2Q8NC56 503 aa20.04■□□□□ 0.8
CLK3-227ENST00000570296 RWDD1Q9H446 243 aaPredicted RBP20.04■□□□□ 0.8
CLK3-227ENST00000570296 BCLAF3A2AJT9 711 aaKnown RBP20.03■□□□□ 0.8
CLK3-227ENST00000570296 TMEM189-UBE2V1I3L0A0 370 aa20.03■□□□□ 0.8
CLK3-227ENST00000570296 HYAL3O43820 417 aaPredicted RBP20.03■□□□□ 0.8
CLK3-227ENST00000570296 RHOBTB1O94844 696 aa20.03■□□□□ 0.8
CLK3-227ENST00000570296 THP07101 528 aa20.03■□□□□ 0.8
CLK3-227ENST00000570296 CREB5Q02930 508 aa20.03■□□□□ 0.8
CLK3-227ENST00000570296 TFDP1Q14186 410 aa20.03■□□□□ 0.8
CLK3-227ENST00000570296 SLC8B1Q6J4K2 584 aa20.03■□□□□ 0.8
CLK3-227ENST00000570296 KIAA1211LQ6NV74 962 aa20.03■□□□□ 0.8
CLK3-227ENST00000570296 TCEAL8Q8IYN2 117 aa20.03■□□□□ 0.8
CLK3-227ENST00000570296 GPR88Q9GZN0 384 aa20.03■□□□□ 0.8
CLK3-227ENST00000570296 DUSP15Q9H1R2 295 aaPredicted RBP20.03■□□□□ 0.8
CLK3-227ENST00000570296 A0A1B0GUA9 196 aa20.02■□□□□ 0.8
CLK3-227ENST00000570296 MOSPD3O75425 235 aa20.02■□□□□ 0.8
CLK3-227ENST00000570296 ABLIM3O94929 683 aa20.02■□□□□ 0.8
CLK3-227ENST00000570296 GSPT1P15170 499 aaKnown RBP20.02■□□□□ 0.8
CLK3-227ENST00000570296 ROR1Q01973 937 aa20.02■□□□□ 0.8
CLK3-227ENST00000570296 PON2Q15165 354 aa20.02■□□□□ 0.8
CLK3-227ENST00000570296 NAB2Q15742 525 aa20.02■□□□□ 0.8
CLK3-227ENST00000570296 ELMOD1Q8N336 334 aa20.02■□□□□ 0.8
CLK3-227ENST00000570296 BMP2KQ9NSY1 1161 aaPredicted RBP20.02■□□□□ 0.8
CLK3-227ENST00000570296 KLK13Q9UKR3 277 aa20.02■□□□□ 0.8
CLK3-227ENST00000570296 SLC8A2Q9UPR5 921 aa20.02■□□□□ 0.8
CLK3-227ENST00000570296 GOLGA8AA7E2F4 631 aa20.01■□□□□ 0.79
CLK3-227ENST00000570296 GOLGA8BA8MQT2 603 aa20.01■□□□□ 0.79
CLK3-227ENST00000570296 PTGESO14684 152 aa20.01■□□□□ 0.79
CLK3-227ENST00000570296 ATG13O75143 517 aa20.01■□□□□ 0.79
CLK3-227ENST00000570296 ATF2P15336 505 aa20.01■□□□□ 0.79
CLK3-227ENST00000570296 TTC22Q5TAA0 569 aa20.01■□□□□ 0.79
CLK3-227ENST00000570296 IQCEQ6IPM2 695 aa20.01■□□□□ 0.79
CLK3-227ENST00000570296 CAMKK1Q8N5S9 505 aa20.01■□□□□ 0.79
CLK3-227ENST00000570296 DDX27Q96GQ7 796 aaKnown RBP20.01■□□□□ 0.79
CLK3-227ENST00000570296 NFKBIZQ9BYH8 718 aa20.01■□□□□ 0.79
CLK3-227ENST00000570296 BRPF3Q9ULD4 1205 aa20.01■□□□□ 0.79
CLK3-227ENST00000570296 INSL5Q9Y5Q6 135 aa20.01■□□□□ 0.79
CLK3-227ENST00000570296 ATG2BQ96BY7 2078 aa20■□□□□ 0.79
CLK3-227ENST00000570296 KHNYNO15037 678 aaKnown RBP20■□□□□ 0.79
CLK3-227ENST00000570296 B4GALT5O43286 388 aa20■□□□□ 0.79
CLK3-227ENST00000570296 CAPNS1P04632 268 aa20■□□□□ 0.79
CLK3-227ENST00000570296 RCAN1P53805 252 aa20■□□□□ 0.79
CLK3-227ENST00000570296 EPHA5P54756 1037 aa20■□□□□ 0.79
CLK3-227ENST00000570296 FGD1P98174 961 aa20■□□□□ 0.79
CLK3-227ENST00000570296 KARSQ15046 597 aaKnown RBP20■□□□□ 0.79
CLK3-227ENST00000570296 DEFB124Q8NES8 71 aa20■□□□□ 0.79
CLK3-227ENST00000570296 ETNPPLQ8TBG4 499 aa20■□□□□ 0.79
CLK3-227ENST00000570296 MTRQ99707 1265 aa20■□□□□ 0.79
CLK3-227ENST00000570296 KIF26AQ9ULI4 1882 aaPredicted RBP20■□□□□ 0.79
CLK3-227ENST00000570296 CYP3A7-CYP3A51PA0A087WV96 503 aa19.99■□□□□ 0.79
CLK3-227ENST00000570296 FAM221BA6H8Z2 402 aa19.99■□□□□ 0.79
CLK3-227ENST00000570296 CDX4O14627 284 aaPredicted RBP19.99■□□□□ 0.79
CLK3-227ENST00000570296 SLC27A2O14975 620 aa19.99■□□□□ 0.79
CLK3-227ENST00000570296 TRAPPC3O43617 180 aa19.99■□□□□ 0.79
CLK3-227ENST00000570296 CYP3A7P24462 503 aa19.99■□□□□ 0.79
CLK3-227ENST00000570296 TKTP29401 623 aaKnown RBP19.99■□□□□ 0.79
CLK3-227ENST00000570296 CDC27P30260 824 aa19.99■□□□□ 0.79
CLK3-227ENST00000570296 PKN3Q6P5Z2 889 aa19.99■□□□□ 0.79
CLK3-227ENST00000570296 C19orf48Q6RUI8 117 aa19.99■□□□□ 0.79
CLK3-227ENST00000570296 CDR2LQ86X02 465 aaPredicted RBP19.99■□□□□ 0.79
CLK3-227ENST00000570296 RSPRY1Q96DX4 576 aa19.99■□□□□ 0.79
CLK3-227ENST00000570296 ZNF512Q96ME7 567 aaPredicted RBP19.99■□□□□ 0.79
CLK3-227ENST00000570296 CYP4F11Q9HBI6 524 aa19.99■□□□□ 0.79
CLK3-227ENST00000570296 ASAH2Q9NR71 780 aa19.99■□□□□ 0.79
CLK3-227ENST00000570296 APC2O95996 2303 aa19.98■□□□□ 0.79
CLK3-227ENST00000570296 EIF4E1BA6NMX2 242 aaKnown RBP19.98■□□□□ 0.79
CLK3-227ENST00000570296 EML1O00423 815 aa19.98■□□□□ 0.79
CLK3-227ENST00000570296 B3GAT3O94766 335 aa19.98■□□□□ 0.79
CLK3-227ENST00000570296 P4HBP07237 508 aaKnown RBP19.98■□□□□ 0.79
CLK3-227ENST00000570296 CAPSQ13938 189 aa19.98■□□□□ 0.79
CLK3-227ENST00000570296 ARHGAP29Q52LW3 1261 aa19.98■□□□□ 0.79
CLK3-227ENST00000570296 OTUD6AQ7L8S5 288 aa19.98■□□□□ 0.79
CLK3-227ENST00000570296 HAUS6Q7Z4H7 955 aa19.98■□□□□ 0.79
CLK3-227ENST00000570296 C4orf19Q8IY42 314 aa19.98■□□□□ 0.79
CLK3-227ENST00000570296 HS6ST3Q8IZP7 471 aa19.98■□□□□ 0.79
CLK3-227ENST00000570296 ABCA7Q8IZY2 2146 aa19.98■□□□□ 0.79
CLK3-227ENST00000570296 CCDC148Q8NFR7 591 aa19.98■□□□□ 0.79
CLK3-227ENST00000570296 SLC32A1Q9H598 525 aa19.98■□□□□ 0.79
CLK3-227ENST00000570296 SLITRK6Q9H5Y7 841 aa19.98■□□□□ 0.79
CLK3-227ENST00000570296 WRAP73Q9P2S5 460 aaPredicted RBP19.98■□□□□ 0.79
CLK3-227ENST00000570296 NUP210Q8TEM1 1887 aaPredicted RBP19.98■□□□□ 0.79
CLK3-227ENST00000570296 H0Y626 953 aa19.97■□□□□ 0.79
CLK3-227ENST00000570296 TRIM16O95361 564 aa19.97■□□□□ 0.79
CLK3-227ENST00000570296 SEC24AO95486 1093 aa19.97■□□□□ 0.79
CLK3-227ENST00000570296 MYL4P12829 197 aa19.97■□□□□ 0.79
CLK3-227ENST00000570296 YWHABP31946 246 aaKnown RBP19.97■□□□□ 0.79
CLK3-227ENST00000570296 PPP2R5CQ13362 524 aa19.97■□□□□ 0.79
CLK3-227ENST00000570296 AAMPQ13685 434 aa19.97■□□□□ 0.79
CLK3-227ENST00000570296 TEAD2Q15562 447 aa19.97■□□□□ 0.79
CLK3-227ENST00000570296 COL28A1Q2UY09 1125 aa19.97■□□□□ 0.79
CLK3-227ENST00000570296 TPGS2Q68CL5 300 aa19.97■□□□□ 0.79
CLK3-227ENST00000570296 TBCKQ8TEA7 893 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms