RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 SNX21Q969T3 373 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 COA7Q96BR5 231 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 SLC2A13Q96QE2 648 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 EYA3Q99504 573 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 LSG1Q9H089 658 aaKnown RBP8.15□□□□□ -1.1
CNOT1-222ENST00000570139 SMOC1Q9H4F8 434 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 SEMA3GQ9NS98 782 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 LUZP4Q9P127 313 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 RAXQ9Y2V3 346 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 ZNF281Q9Y2X9 895 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 RWDD3Q9Y3V2 267 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 SNX11Q9Y5W9 270 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 LAMA4Q16363 1823 aa8.15□□□□□ -1.11
CNOT1-222ENST00000570139 SRCAPQ6ZRS2 3230 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 IRS2Q9Y4H2 1338 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 A0A0D9SFI3 127 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 A0A1W2PQ27 194 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 A0A1W2PQ64 194 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 A0A1W2PQC6 194 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 A0A1W2PQD8 194 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 UBA6A0AVT1 1052 aaPredicted RBP8.14□□□□□ -1.11
CNOT1-222ENST00000570139 B3GALT2O43825 422 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 CLEC2LP0C7M8 214 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 GNAT2P19087 354 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 ADD2P35612 726 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 RASSF7Q02833 373 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 SEC23AQ15436 765 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 ZNF354CQ86Y25 554 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 C2CD5Q86YS7 1000 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 TRIM48Q8IWZ4 208 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 KIAA0319LQ8IZA0 1049 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 FAM181AQ8N9Y4 354 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 PPP1R35Q8TAP8 253 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 RSAD2Q8WXG1 361 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 MAP4K1Q92918 833 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 MAP6Q96JE9 813 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 MFSD14AQ96MC6 490 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 SENP7Q9BQF6 1050 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 MTA3Q9BTC8 594 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 RIC8BQ9NVN3 520 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 ZC3H7BQ9UGR2 993 aaKnown RBP8.14□□□□□ -1.11
CNOT1-222ENST00000570139 CTNNA3Q9UI47 895 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 SERPINB13Q9UIV8 391 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 LZTS1Q9Y250 596 aa8.14□□□□□ -1.11
CNOT1-222ENST00000570139 PITPNM2Q9BZ72 1349 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 TMEM265A0A087WTH1 108 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 PRAMEF25A6NGN4 478 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-222ENST00000570139 HGSO14964 777 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-222ENST00000570139 NBNO60934 754 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 FRAT2O75474 233 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-222ENST00000570139 UFL1O94874 794 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 UBXN7O94888 489 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 PSMA5P28066 241 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 SLC6A11P48066 632 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 BCAR1P56945 870 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 HERVK_113P62684 666 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 DUSP4Q13115 394 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 ALFQ53S48 1182 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 PITRM1Q5JRX3 1037 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 SLC9C2Q5TAH2 1124 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 BTBD8Q5XKL5 378 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 CCDC70Q6NSX1 233 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 STK11IPQ8N1F8 1099 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 SUPT20HQ8NEM7 779 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 DEPTORQ8TB45 409 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 TBC1D22AQ8WUA7 517 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 FAM84BQ96KN1 310 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-222ENST00000570139 FAM227BQ96M60 508 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 B3GNT5Q9BYG0 378 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 TM6SF1Q9BZW5 370 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 NUP62CLQ9H1M0 184 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 POFUT1Q9H488 388 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 ARFGAP3Q9NP61 516 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 NGRNQ9NPE2 291 aaKnown RBP8.13□□□□□ -1.11
CNOT1-222ENST00000570139 TRMT13Q9NUP7 481 aaKnown RBP8.13□□□□□ -1.11
CNOT1-222ENST00000570139 GTF2A1LQ9UNN4 478 aa8.13□□□□□ -1.11
CNOT1-222ENST00000570139 MORC2Q9Y6X9 1032 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-222ENST00000570139 MAST3O60307 1309 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 FADS2P1A8MWK0 482 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 MGEA5O60502 916 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 IDH1O75874 414 aaKnown RBP8.12□□□□□ -1.11
CNOT1-222ENST00000570139 ESR1P03372 595 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 C4BPAP04003 597 aaKnown RBP8.12□□□□□ -1.11
CNOT1-222ENST00000570139 IL1R1P14778 569 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 PEX2P28328 305 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 GYG1P46976 350 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 NT5C2P49902 561 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 TGFB2P61812 414 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 GSTO1P78417 241 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 GPSM2P81274 684 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 SPIDRQ14159 915 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 PDCD2Q16342 344 aaPredicted RBP8.12□□□□□ -1.11
CNOT1-222ENST00000570139 ANO6Q4KMQ2 910 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 TTC38Q5R3I4 469 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 DPP8Q6V1X1 898 aaPredicted RBP8.12□□□□□ -1.11
CNOT1-222ENST00000570139 SLCO6A1Q86UG4 719 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 CABP7Q86V35 215 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 KRT78Q8N1N4 520 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 PPM1NQ8N819 430 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms