RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 GPR152Q8TDT2 470 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 ATOH1Q92858 354 aaPredicted RBP15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 FGF13Q92913 245 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 UROC1Q96N76 676 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 FIZ1Q96SL8 496 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 REEP2Q9BRK0 252 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 MFSD1Q9H3U5 465 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 DNMT3BQ9UBC3 853 aaKnown RBP15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 CA14Q9ULX7 337 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 FANCMQ8IYD8 2048 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 COL4A2P08572 1712 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 H3BQV1 296 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 TOM1L1O75674 476 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 SEC24AO95486 1093 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 SRFP11831 508 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 NUBP1P53384 320 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 YARSP54577 528 aaKnown RBP15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 MCL1Q07820 350 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 MRPL58Q14197 206 aaKnown RBP15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 NOLC1Q14978 699 aaKnown RBP eCLIP15.14■□□□□ 0.019e-10■□□□□ 10.8
GTF3C1-211ENST00000569653 SLC39A4Q6P5W5 647 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 ACAP3Q96P50 834 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 TCHPQ9BT92 498 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 TIPINQ9BVW5 301 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 TOPORSQ9NS56 1045 aaPredicted RBP15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 WNT16Q9UBV4 365 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 FBXL21Q9UKT6 434 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 CDH7Q9ULB5 785 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 SMC3Q9UQE7 1217 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 KIF3AQ9Y496 699 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 DMXL1Q9Y485 3027 aa15.14■□□□□ 0.01
GTF3C1-211ENST00000569653 PATJQ8NI35 1801 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 ABLIM3O94929 683 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 VNN2O95498 520 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 POU2F2P09086 479 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 PLCG1P19174 1290 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 GUCY2FP51841 1108 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 ZNF131P52739 623 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 CUL4AQ13619 759 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 MCM6Q14566 821 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 KARSQ15046 597 aaKnown RBP15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 SLC8B1Q6J4K2 584 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 PDXDC1Q6P996 788 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 ZPBP2Q6X784 338 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 ASCL5Q7RTU5 278 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 GPBP1Q86WP2 473 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 NPAS3Q8IXF0 933 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 CCDC105Q8IYK2 499 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 ING5Q8WYH8 240 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 KCNN1Q92952 543 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 IKZF4Q9H2S9 585 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 FBXL5Q9UKA1 691 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 POLIQ9UNA4 740 aa15.13■□□□□ 0.01
GTF3C1-211ENST00000569653 DCHS1Q96JQ0 3298 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 TTC26A0AVF1 554 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 TISP43B9A030 160 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 PROB1E7EW31 1015 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 PPEF2O14830 753 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 GFRA3O60609 400 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 LRRN2O75325 713 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 GLULP15104 373 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 GPC5P78333 572 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 DHX8Q14562 1220 aaKnown RBP15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 PTPAQ15257 358 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 SF3A1Q15459 793 aaKnown RBP15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 ZBTB6Q15916 424 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 LARP1BQ659C4 914 aaKnown RBP15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 FAM173BQ6P4H8 233 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 ANKS3Q6ZW76 656 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 HAUS6Q7Z4H7 955 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 APBB1IPQ7Z5R6 666 aaPredicted RBP15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 SUSD3Q96L08 255 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 KXD1Q9BQD3 176 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 TBC1D17Q9HA65 648 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 SLC2A4RGQ9NR83 387 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 SLC38A7Q9NVC3 462 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 DLGAP2Q9P1A6 1054 aa15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 EP300Q09472 2414 aaPredicted RBP15.12■□□□□ 0.01
GTF3C1-211ENST00000569653 ARHGEF37A1IGU5 675 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 PIGRP01833 764 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 CEBPBP17676 345 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 RPL9P32969 192 aaKnown RBP15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 NBL1P41271 181 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 CCR2P41597 374 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 STRN3Q13033 797 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 ENOX2Q16206 610 aaKnown RBP15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 FRMD5Q7Z6J6 570 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 DTWD2Q8NBA8 298 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 ZNF461Q8TAF7 563 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 RAD54LQ92698 747 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 NXPE3Q969Y0 559 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 TCEAL4Q96EI5 215 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 AK8Q96MA6 479 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 PLA2G2FQ9BZM2 168 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 FOXQ1Q9C009 403 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 ARHGEF3Q9NR81 526 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 KCND2Q9NZV8 630 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 CLIC4Q9Y696 253 aa15.11■□□□□ 0.01
GTF3C1-211ENST00000569653 F5P12259 2224 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms