RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 COQ4Q9Y3A0 265 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 ATICP31939 592 aa25.33■■□□□ 1.65
RAB40C-212ENST00000569575 ALDH7A1P49419 539 aaKnown RBP25.33■■□□□ 1.65
RAB40C-212ENST00000569575 RBP5P82980 135 aa25.33■■□□□ 1.65
RAB40C-212ENST00000569575 VWA3BQ502W6 1294 aa25.33■■□□□ 1.65
RAB40C-212ENST00000569575 C1orf220Q5T0J3 134 aa25.33■■□□□ 1.65
RAB40C-212ENST00000569575 DCLRE1AQ6PJP8 1040 aa25.33■■□□□ 1.65
RAB40C-212ENST00000569575 TRAPPC11Q7Z392 1133 aa25.33■■□□□ 1.65
RAB40C-212ENST00000569575 COLGALT2Q8IYK4 626 aa25.33■■□□□ 1.65
RAB40C-212ENST00000569575 LRRC52Q8N7C0 313 aa25.33■■□□□ 1.65
RAB40C-212ENST00000569575 TAF4BQ92750 862 aa25.33■■□□□ 1.65
RAB40C-212ENST00000569575 CLP1Q92989 425 aaKnown RBP25.33■■□□□ 1.65
RAB40C-212ENST00000569575 NDST4Q9H3R1 872 aa25.33■■□□□ 1.65
RAB40C-212ENST00000569575 ANO9A1A5B4 782 aa25.32■■□□□ 1.64
RAB40C-212ENST00000569575 TMEM189-UBE2V1I3L0A0 370 aa25.32■■□□□ 1.64
RAB40C-212ENST00000569575 STAU1O95793 577 aaKnown RBP25.32■■□□□ 1.64
RAB40C-212ENST00000569575 FMO5P49326 533 aa25.32■■□□□ 1.64
RAB40C-212ENST00000569575 MXI1P50539 228 aa25.32■■□□□ 1.64
RAB40C-212ENST00000569575 DLG4P78352 724 aa25.32■■□□□ 1.64
RAB40C-212ENST00000569575 KRT31Q15323 416 aa25.32■■□□□ 1.64
RAB40C-212ENST00000569575 GLRA4Q5JXX5 417 aa25.32■■□□□ 1.64
RAB40C-212ENST00000569575 PRPF38BQ5VTL8 546 aaKnown RBP25.32■■□□□ 1.64
RAB40C-212ENST00000569575 SV2AQ7L0J3 742 aa25.32■■□□□ 1.64
RAB40C-212ENST00000569575 ZNF516Q92618 1163 aa25.32■■□□□ 1.64
RAB40C-212ENST00000569575 POP1Q99575 1024 aaKnown RBP25.32■■□□□ 1.64
RAB40C-212ENST00000569575 COLEC11Q9BWP8 271 aa25.32■■□□□ 1.64
RAB40C-212ENST00000569575 MSRAQ9UJ68 235 aa25.32■■□□□ 1.64
RAB40C-212ENST00000569575 ARHGEF37A1IGU5 675 aa25.31■■□□□ 1.64
RAB40C-212ENST00000569575 PHACTR2O75167 634 aa25.31■■□□□ 1.64
RAB40C-212ENST00000569575 TPM3P06753 285 aa25.31■■□□□ 1.64
RAB40C-212ENST00000569575 PPM1AP35813 382 aa25.31■■□□□ 1.64
RAB40C-212ENST00000569575 AFF1P51825 1210 aaKnown RBP25.31■■□□□ 1.64
RAB40C-212ENST00000569575 WNT7BP56706 349 aa25.31■■□□□ 1.64
RAB40C-212ENST00000569575 SMAD3P84022 425 aaKnown RBP25.31■■□□□ 1.64
RAB40C-212ENST00000569575 FAM117BQ6P1L5 589 aa25.31■■□□□ 1.64
RAB40C-212ENST00000569575 CHRDL2Q6WN34 429 aa25.31■■□□□ 1.64
RAB40C-212ENST00000569575 CCDC150Q8NCX0 1101 aa25.31■■□□□ 1.64
RAB40C-212ENST00000569575 FBXL13Q8NEE6 735 aa25.31■■□□□ 1.64
RAB40C-212ENST00000569575 ZNF560Q96MR9 790 aa25.31■■□□□ 1.64
RAB40C-212ENST00000569575 MTMR12Q9C0I1 747 aa25.31■■□□□ 1.64
RAB40C-212ENST00000569575 NRDE2Q9H7Z3 1164 aa25.31■■□□□ 1.64
RAB40C-212ENST00000569575 PLAGL2Q9UPG8 496 aa25.31■■□□□ 1.64
RAB40C-212ENST00000569575 PIRO00625 290 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 DDHD2O94830 711 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 GCLMP48507 274 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 PPP3CAQ08209 521 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 MYO1EQ12965 1108 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 BIRC3Q13489 604 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 TRPC3Q13507 836 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 UPP1Q16831 310 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 SGSM1Q2NKQ1 1148 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 FKBP15Q5T1M5 1219 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 C1orf127Q8N9H9 656 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 OR5B17Q8NGF7 314 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 PLVAPQ9BX97 442 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 IMPG2Q9BZV3 1241 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 CWH43Q9H720 699 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 VRTNQ9H8Y1 702 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 PCDH10Q9P2E7 1040 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 FAN1Q9Y2M0 1017 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 PCDHB12Q9Y5F1 795 aa25.3■■□□□ 1.64
RAB40C-212ENST00000569575 TRAPPC3O43617 180 aa25.29■■□□□ 1.64
RAB40C-212ENST00000569575 ZC3H11AO75152 810 aaKnown RBP eCLIP25.29■■□□□ 1.64
RAB40C-212ENST00000569575 TRIM49P0CI25 452 aa25.29■■□□□ 1.64
RAB40C-212ENST00000569575 TRIM49CP0CI26 452 aa25.29■■□□□ 1.64
RAB40C-212ENST00000569575 GATMP50440 423 aa25.29■■□□□ 1.64
RAB40C-212ENST00000569575 COPB1P53618 953 aaKnown RBP25.29■■□□□ 1.64
RAB40C-212ENST00000569575 LRIT3Q3SXY7 679 aa25.29■■□□□ 1.64
RAB40C-212ENST00000569575 C9orf57Q5W0N0 161 aa25.29■■□□□ 1.64
RAB40C-212ENST00000569575 ZNF280BQ86YH2 543 aa25.29■■□□□ 1.64
RAB40C-212ENST00000569575 RNF214Q8ND24 703 aa25.29■■□□□ 1.64
RAB40C-212ENST00000569575 FAM81BQ96LP2 452 aa25.29■■□□□ 1.64
RAB40C-212ENST00000569575 ZNF558Q96NG5 402 aa25.29■■□□□ 1.64
RAB40C-212ENST00000569575 CXCL16Q9H2A7 254 aa25.29■■□□□ 1.64
RAB40C-212ENST00000569575 FAM124BQ9H5Z6 455 aaPredicted RBP25.29■■□□□ 1.64
RAB40C-212ENST00000569575 PTPRJQ12913 1337 aa25.29■■□□□ 1.64
RAB40C-212ENST00000569575 SERPINC1P01008 464 aa25.28■■□□□ 1.64
RAB40C-212ENST00000569575 RB1P06400 928 aa25.28■■□□□ 1.64
RAB40C-212ENST00000569575 GALTP07902 379 aa25.28■■□□□ 1.64
RAB40C-212ENST00000569575 FAM163BP0C2L3 166 aa25.28■■□□□ 1.64
RAB40C-212ENST00000569575 ELAVL2Q12926 359 aaKnown RBP25.28■■□□□ 1.64
RAB40C-212ENST00000569575 PAN2Q504Q3 1202 aaKnown RBP25.28■■□□□ 1.64
RAB40C-212ENST00000569575 MIIPQ5JXC2 388 aa25.28■■□□□ 1.64
RAB40C-212ENST00000569575 TDRD10Q5VZ19 366 aaKnown RBP25.28■■□□□ 1.64
RAB40C-212ENST00000569575 GAS2L3Q86XJ1 694 aa25.28■■□□□ 1.64
RAB40C-212ENST00000569575 C18orf25Q96B23 403 aaPredicted RBP25.28■■□□□ 1.64
RAB40C-212ENST00000569575 RBSNQ9H1K0 784 aa25.28■■□□□ 1.64
RAB40C-212ENST00000569575 TUBGCP4Q9UGJ1 667 aa25.28■■□□□ 1.64
RAB40C-212ENST00000569575 DAAM1Q9Y4D1 1078 aa25.28■■□□□ 1.64
RAB40C-212ENST00000569575 LGALS16A8MUM7 142 aa25.27■■□□□ 1.64
RAB40C-212ENST00000569575 PODXLO00592 558 aa25.27■■□□□ 1.64
RAB40C-212ENST00000569575 CBFA2T2O43439 604 aa25.27■■□□□ 1.64
RAB40C-212ENST00000569575 ITGB3P05106 788 aa25.27■■□□□ 1.64
RAB40C-212ENST00000569575 ATP1A3P13637 1013 aa25.27■■□□□ 1.64
RAB40C-212ENST00000569575 BCAR1P56945 870 aa25.27■■□□□ 1.64
RAB40C-212ENST00000569575 MYL7Q01449 175 aa25.27■■□□□ 1.64
RAB40C-212ENST00000569575 SOX4Q06945 474 aaPredicted RBP25.27■■□□□ 1.64
RAB40C-212ENST00000569575 NCOA4Q13772 614 aa25.27■■□□□ 1.64
RAB40C-212ENST00000569575 SV2CQ496J9 727 aa25.27■■□□□ 1.64
RAB40C-212ENST00000569575 HSP90AA4PQ58FG1 418 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms