RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 C2CD2LO14523 706 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 CLASP2O75122 1294 aaKnown RBP10.67□□□□□ -0.7
CLN6-209ENST00000569336 C1RP00736 705 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 BMP1P13497 986 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 CYP3A5P20815 502 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 KLRC2P26717 231 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 TNFSF9P41273 254 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 NDUFA8P51970 172 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 SNRPFP62306 86 aaKnown RBP10.67□□□□□ -0.7
CLN6-209ENST00000569336 KCNC3Q14003 757 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 TMEM132DQ14C87 1099 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 ENOX2Q16206 610 aaKnown RBP10.67□□□□□ -0.7
CLN6-209ENST00000569336 FAM171A1Q5VUB5 890 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 CES5AQ6NT32 575 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 KANK3Q6NY19 840 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 LLGL2Q6P1M3 1020 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 ARMCX5Q6P1M9 558 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 HS2ST1Q7LGA3 356 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 NT5DC4Q86YG4 428 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 MSLNLQ96KJ4 702 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 ZMAT2Q96NC0 199 aaKnown RBP10.67□□□□□ -0.7
CLN6-209ENST00000569336 TTPALQ9BTX7 342 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 GPR62Q9BZJ7 368 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 CXCL16Q9H2A7 254 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 BLZF1Q9H2G9 400 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 GOLGA2P5Q9HBQ8 144 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 GDPD2Q9HCC8 539 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 CHST7Q9NS84 486 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 CLEC1BQ9P126 229 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 FNIP2Q9P278 1114 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 CGNQ9P2M7 1197 aaKnown RBP10.67□□□□□ -0.7
CLN6-209ENST00000569336 CACNG4Q9UBN1 327 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 PRKAG3Q9UGI9 489 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 NUB1Q9Y5A7 615 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 MIA3Q5JRA6 1907 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 PATJQ8NI35 1801 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.66□□□□□ -0.7
CLN6-209ENST00000569336 ARHGEF37A1IGU5 675 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 MBTPS2O43462 519 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 PRPF6O94906 941 aaKnown RBP10.66□□□□□ -0.7
CLN6-209ENST00000569336 GLUD1P00367 558 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 ADRB2P07550 413 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 CNPP09543 421 aaKnown RBP10.66□□□□□ -0.7
CLN6-209ENST00000569336 PAX3P23760 479 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 ACOT2P49753 483 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 ITIH3Q06033 890 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 SOX4Q06945 474 aaPredicted RBP10.66□□□□□ -0.7
CLN6-209ENST00000569336 DLX2Q07687 328 aaPredicted RBP10.66□□□□□ -0.7
CLN6-209ENST00000569336 EHHADHQ08426 723 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 KCNA1Q09470 495 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 PSMD2Q13200 908 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 CUL4BQ13620 913 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 SMAD2Q15796 467 aaKnown RBP10.66□□□□□ -0.7
CLN6-209ENST00000569336 CLUL1Q15846 466 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 PSMD5Q16401 504 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 KIAA0319Q5VV43 1072 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 ANKRD54Q6NXT1 300 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 ANKS3Q6ZW76 656 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 EPM2AIP1Q7L775 607 aaPredicted RBP10.66□□□□□ -0.7
CLN6-209ENST00000569336 BEST2Q8NFU1 509 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 VN1R2Q8NFZ6 395 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.66□□□□□ -0.7
CLN6-209ENST00000569336 GOLGA5Q8TBA6 731 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 RIN2Q8WYP3 895 aaPredicted RBP10.66□□□□□ -0.7
CLN6-209ENST00000569336 PIK3R5Q8WYR1 880 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 RABGGTAQ92696 567 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 FAM212AQ96EL1 285 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 PAGE5Q96GU1 130 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 CHAMP1Q96JM3 812 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 EPHX3Q9H6B9 360 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 SFXN1Q9H9B4 322 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 RXFP1Q9HBX9 757 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 TUBGCP4Q9UGJ1 667 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 HOOK1Q9UJC3 728 aaKnown RBP10.66□□□□□ -0.7
CLN6-209ENST00000569336 C2CD2Q9Y426 696 aa10.66□□□□□ -0.7
CLN6-209ENST00000569336 LACTBL1A8MY62 500 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 TISP43B9A030 160 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 SYN3O14994 580 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 TEX28O15482 410 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 LILRB3O75022 631 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 KIF20AO95235 890 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 IL9P15248 144 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 FGFR3P22607 806 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 LRPAP1P30533 357 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 MCM4P33991 863 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 CLCN4P51793 760 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 FAM160A1Q05DH4 1040 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 BMT2Q1RMZ1 405 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 RTP2Q5QGT7 225 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 ZBTB41Q5SVQ8 909 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 JADE1Q6IE81 842 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 KRBA2Q6ZNG9 492 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 CEP57Q86XR8 500 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 BRSK2Q8IWQ3 736 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 GRAMD1CQ8IYS0 662 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 GPD1LQ8N335 351 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 ZNF507Q8TCN5 953 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 SLC22A17Q8WUG5 538 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 HPS3Q969F9 1004 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 C18orf25Q96B23 403 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms