RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PRSS55Q6UWB4 352 aaPredicted RBP15.76■□□□□ 0.11
COMMD4-225ENST00000569245 SPATA31D4Q6ZUB0 917 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 C18orf25Q96B23 403 aaPredicted RBP15.76■□□□□ 0.11
COMMD4-225ENST00000569245 ZMAT2Q96NC0 199 aaKnown RBP15.76■□□□□ 0.11
COMMD4-225ENST00000569245 NECTIN4Q96NY8 510 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 C1QTNF1Q9BXJ1 281 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 HAPLN2Q9GZV7 340 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 SFXN1Q9H9B4 322 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 CNTN3Q9P232 1028 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 SEL1LQ9UBV2 794 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 DPP7Q9UHL4 492 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 CDH22Q9UJ99 828 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 TULP1O00294 542 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-225ENST00000569245 PODXLO00592 558 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 PIGRP01833 764 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 CXCL8P10145 99 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 SP100P23497 879 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-225ENST00000569245 MTHFRP42898 656 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 AMPD3Q01432 767 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 SOX4Q06945 474 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-225ENST00000569245 ZNF720Q7Z2F6 126 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 MAP4K3Q8IVH8 894 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 GPR65Q8IYL9 337 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 STAMQ92783 540 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 KCNN1Q92952 543 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 DNAJC19Q96DA6 116 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 FAM212AQ96EL1 285 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 FIZ1Q96SL8 496 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 LRRC27Q9C0I9 530 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 GZF1Q9H116 711 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-225ENST00000569245 ST6GALNAC4Q9H4F1 302 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 RPF1Q9H9Y2 349 aaKnown RBP15.75■□□□□ 0.11
COMMD4-225ENST00000569245 PLEKHA5Q9HAU0 1116 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 MAN1C1Q9NR34 630 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 PANK4Q9NVE7 773 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 KIAA1468Q9P260 1216 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 FNIP2Q9P278 1114 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 NUB1Q9Y5A7 615 aa15.75■□□□□ 0.11
COMMD4-225ENST00000569245 A0A0B4J269 797 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 SYCE3A1L190 88 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 LOC730098B7Z3J9 87 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 PI4K2BG5E9Z4 385 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 TMEM189-UBE2V1I3L0A0 370 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 I3L4J1 428 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 OGTO15294 1046 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 DCXO43602 365 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 GCNT3O95395 438 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 RPL9P32969 192 aaKnown RBP15.74■□□□□ 0.11
COMMD4-225ENST00000569245 TNFSF9P41273 254 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 AFMP43652 599 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 ZNF445P59923 1031 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 PPP2R3AQ06190 1150 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 SPAG1Q07617 926 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 PNOCQ13519 176 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 PSMD5Q16401 504 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 SLFN12LQ6IEE8 588 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 CNNM4Q6P4Q7 775 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 PDXDC1Q6P996 788 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-225ENST00000569245 RNF135Q8IUD6 432 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 CCDC65Q8IXS2 484 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 GRAMD1CQ8IYS0 662 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 SPATA20Q8TB22 786 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 KIF12Q96FN5 646 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 C7orf25Q9BPX7 421 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 EXOC7Q9UPT5 735 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 NR2E1Q9Y466 385 aa15.74■□□□□ 0.11
COMMD4-225ENST00000569245 TDRD15B5MCY1 1934 aaKnown RBP15.73■□□□□ 0.11
COMMD4-225ENST00000569245 LACTBL1A8MY62 500 aa15.73■□□□□ 0.11
COMMD4-225ENST00000569245 ANKRD63C9JTQ0 380 aa15.73■□□□□ 0.11
COMMD4-225ENST00000569245 MEFVO15553 781 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-225ENST00000569245 TGM5O43548 720 aa15.73■□□□□ 0.11
COMMD4-225ENST00000569245 PRR29P0C7W0 189 aa15.73■□□□□ 0.11
COMMD4-225ENST00000569245 IGFBP6P24592 240 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-225ENST00000569245 DPYDQ12882 1025 aa15.73■□□□□ 0.11
COMMD4-225ENST00000569245 ZBTB41Q5SVQ8 909 aa15.73■□□□□ 0.11
COMMD4-225ENST00000569245 SYCP3Q8IZU3 236 aa15.73■□□□□ 0.11
COMMD4-225ENST00000569245 C3orf58Q8NDZ4 430 aa15.73■□□□□ 0.11
COMMD4-225ENST00000569245 LNX1Q8TBB1 728 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-225ENST00000569245 PIK3R5Q8WYR1 880 aa15.73■□□□□ 0.11
COMMD4-225ENST00000569245 HVCN1Q96D96 273 aa15.73■□□□□ 0.11
COMMD4-225ENST00000569245 ACCSQ96QU6 501 aa15.73■□□□□ 0.11
COMMD4-225ENST00000569245 POMKQ9H5K3 350 aa15.73■□□□□ 0.11
COMMD4-225ENST00000569245 MUTYHQ9UIF7 546 aa15.73■□□□□ 0.11
COMMD4-225ENST00000569245 PCDHB13Q9Y5F0 798 aa15.73■□□□□ 0.11
COMMD4-225ENST00000569245 CCDC195A0A1B0GUA6 201 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 TTC26A0AVF1 554 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 TISP43B9A030 160 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 SMC2O95347 1197 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 FGFR3P22607 806 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 BRCC3P46736 316 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 ACOT2P49753 483 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 CUL4BQ13620 913 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 ENOX2Q16206 610 aaKnown RBP15.72■□□□□ 0.11
COMMD4-225ENST00000569245 SLC39A4Q6P5W5 647 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 GPR149Q86SP6 731 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 POMGNT1Q8WZA1 660 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 CLSTN3Q9BQT9 956 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 FUCA2Q9BTY2 467 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 TRIM9Q9C026 710 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms