RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 NPHS2Q9NP85 383 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 IARS2Q9NSE4 1012 aaKnown RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 PDZK1P1A8MUH7 402 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 WDR64B1ANS9 1081 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 ECM2O94769 699 aaPredicted RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 LARGE1O95461 756 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 ALDH5A1P51649 535 aaPredicted RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 NAA20P61599 178 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 TTBK2Q6IQ55 1244 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 LVRNQ6Q4G3 990 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 TCAIMQ8N3R3 496 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 KIF2BQ8N4N8 673 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 MAGEE1Q9HCI5 957 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 KCNK4Q9NYG8 393 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 PLA2R1Q13018 1463 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 ARHGEF40Q8TER5 1519 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 ATP10AO60312 1499 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 PDLIM1O00151 329 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 PLCG1P19174 1290 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 TMOD1P28289 359 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 PRCPP42785 496 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 NAB1Q13506 487 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 CCDC33Q8N5R6 958 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 CCDC85AQ96PX6 553 aaPredicted RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 DCLK3Q9C098 648 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 PSTPIP2Q9H939 334 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 KCND2Q9NZV8 630 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 CRNNQ9UBG3 495 aaPredicted RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 CDYLQ9Y232 598 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 GPC6Q9Y625 555 aaPredicted RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 MYO3BQ8WXR4 1341 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 LAMC3Q9Y6N6 1575 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 GLRA3O75311 464 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 MAGEA4P43358 317 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 LIG4P49917 911 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 KDSRQ06136 332 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 DPYDQ12882 1025 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 BRDTQ58F21 947 aaPredicted RBP7.46□□□□□ -1.21
CNOT1-216ENST00000569240 PACS1Q6VY07 963 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 FKBP9P1Q75LS8 142 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 MIGA2Q7L4E1 593 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 P3H2Q8IVL5 708 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 EYA1Q99502 592 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 EYA3Q99504 573 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 ADNPQ9H2P0 1102 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 PHF11Q9UIL8 331 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 TPRKBQ9Y3C4 175 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 MAP3K19Q56UN5 1328 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 ADGRA2Q96PE1 1338 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 CENPXA8MT69 81 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 NFIBO00712 420 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 IDH3BO43837 385 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 PGM3O95394 542 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 CCDC130P13994 396 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 RFC5P40937 340 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 DAB2P98082 770 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 TBX2Q13207 712 aaPredicted RBP7.46□□□□□ -1.21
CNOT1-216ENST00000569240 ZNF268Q14587 947 aaPredicted RBP7.46□□□□□ -1.21
CNOT1-216ENST00000569240 LRRC14Q15048 493 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 LIN52Q52LA3 116 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 CMPK2Q5EBM0 449 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 CCDC36Q8IYA8 594 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 SHCBP1Q8NEM2 672 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 DEPTORQ8TB45 409 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 RIN2Q8WYP3 895 aaPredicted RBP7.46□□□□□ -1.21
CNOT1-216ENST00000569240 USE1Q9NZ43 259 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 EMC3Q9P0I2 261 aa7.46□□□□□ -1.21
CNOT1-216ENST00000569240 PKN2Q16513 984 aaKnown RBP7.46□□□□□ -1.22
CNOT1-216ENST00000569240 CCDC157Q569K6 752 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 FOXR2Q6PJQ5 311 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 PRPF39Q86UA1 669 aaKnown RBP7.46□□□□□ -1.22
CNOT1-216ENST00000569240 KCTD6Q8NC69 237 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 NEDD1Q8NHV4 660 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 SMCR8Q8TEV9 937 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-216ENST00000569240 AGAP11Q8TF27 550 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 GPBP1L1Q9HC44 474 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-216ENST00000569240 PNPLA3Q9NST1 481 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 GAS2O43903 313 aaKnown RBP7.46□□□□□ -1.22
CNOT1-216ENST00000569240 SASH3O75995 380 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 GABPAQ06546 454 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 KCNH2Q12809 1159 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 ODR4Q5SWX8 454 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 PROSER2Q86WR7 435 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-216ENST00000569240 CASKIN2Q8WXE0 1202 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 ZNF446Q9NWS9 450 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 BACH1O14867 736 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 MCL1Q07820 350 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 ARMC4Q5T2S8 1044 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 MFSD4BQ5TF39 518 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 SHC4Q6S5L8 630 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 CAPN12Q6ZSI9 719 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 TSHZ1Q6ZSZ6 1077 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 ZBED8Q8IZ13 594 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 LCORLQ8N3X6 602 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 ZBTB8BQ8NAP8 495 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-216ENST00000569240 HPS1Q92902 700 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 RNF34Q969K3 372 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 VTI1BQ9UEU0 232 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 LAMC1P11047 1609 aa7.46□□□□□ -1.22
CNOT1-216ENST00000569240 TAF4O00268 1085 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms