RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 CERS4Q9HA82 394 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 DPP3Q9NY33 737 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 TUBGCP4Q9UGJ1 667 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 ARMCX3Q9UH62 379 aaPredicted RBP9.87□□□□□ -0.83
CHD9-219ENST00000569225 LZTS1Q9Y250 596 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 SF3B1O75533 1304 aaKnown RBP eCLIP9.86□□□□□ -0.83
CHD9-219ENST00000569225 TMEM189-UBE2V1I3L0A0 370 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 IKBKBO14920 756 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 TRAPPC3O43617 180 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 B4GALT3O60512 393 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 B3GAT3O94766 335 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 LRPAP1P30533 357 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 PBX3P40426 434 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 FXR1P51114 621 aaKnown RBP eCLIP9.86□□□□□ -0.83
CHD9-219ENST00000569225 VAMP7P51809 220 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 ELAVL2Q12926 359 aaKnown RBP9.86□□□□□ -0.83
CHD9-219ENST00000569225 UPP1Q16831 310 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 CCDC40Q4G0X9 1142 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 FRMD5Q7Z6J6 570 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 FAM114A1Q8IWE2 563 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 EFCAB13Q8IY85 973 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 DUSP9Q99956 384 aaKnown RBP9.86□□□□□ -0.83
CHD9-219ENST00000569225 LMAN2LQ9H0V9 348 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 TTYH1Q9H313 450 aaPredicted RBP9.86□□□□□ -0.83
CHD9-219ENST00000569225 INTS13Q9NVM9 706 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 ITGA11Q9UKX5 1188 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 NUB1Q9Y5A7 615 aa9.86□□□□□ -0.83
CHD9-219ENST00000569225 SYCE3A1L190 88 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 NT5C1B-RDH14C9J2C7 533 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 PNPLA4P41247 253 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 CLCNKBP51801 687 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 RBP5P82980 135 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 SOX4Q06945 474 aaPredicted RBP9.85□□□□□ -0.83
CHD9-219ENST00000569225 BFSP1Q12934 665 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 ZSCAN23Q3MJ62 389 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 DDX53Q86TM3 631 aaKnown RBP9.85□□□□□ -0.83
CHD9-219ENST00000569225 PARD3BQ8TEW8 1205 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 EEF2KMTQ96G04 330 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 ZNF560Q96MR9 790 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 SRRTQ9BXP5 876 aaKnown RBP9.85□□□□□ -0.83
CHD9-219ENST00000569225 GOLGA2P5Q9HBQ8 144 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 ADAM28Q9UKQ2 775 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 ARHGEF37A1IGU5 675 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 LPXNO60711 386 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 PHACTR2O75167 634 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 KIF4AO95239 1232 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 CAVIN2O95810 425 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 ITGB1P05556 798 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 GTF2H1P32780 548 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 CLDN10P78369 228 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 GRIN2CQ14957 1233 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 C9orf57Q5W0N0 161 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 PDE12Q6L8Q7 609 aaKnown RBP9.85□□□□□ -0.83
CHD9-219ENST00000569225 SPRED2Q7Z698 418 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 DEFB123Q8N688 67 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 ENOX1Q8TC92 643 aaKnown RBP9.85□□□□□ -0.83
CHD9-219ENST00000569225 GDPD5Q8WTR4 605 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 GAS2L1Q99501 681 aaPredicted RBP9.85□□□□□ -0.83
CHD9-219ENST00000569225 MTMR12Q9C0I1 747 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 PRDM12Q9H4Q4 367 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 THAP9Q9H5L6 903 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 ALG13Q9NP73 1137 aaKnown RBP9.85□□□□□ -0.83
CHD9-219ENST00000569225 MARCH5Q9NX47 278 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 MAGEC2Q9UBF1 373 aaPredicted RBP9.85□□□□□ -0.83
CHD9-219ENST00000569225 PTPRSQ13332 1948 aa9.85□□□□□ -0.83
CHD9-219ENST00000569225 LRRIQ3A6PVS8 624 aaPredicted RBP9.84□□□□□ -0.83
CHD9-219ENST00000569225 ITGB3P05106 788 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 KRT19P08727 400 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 WNT7BP56706 349 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 MYO1EQ12965 1108 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 BIRC3Q13489 604 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 TRPC3Q13507 836 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 DCAF17Q5H9S7 520 aaPredicted RBP9.84□□□□□ -0.83
CHD9-219ENST00000569225 TCERG1LQ5VWI1 586 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 LMBRD2Q68DH5 695 aaPredicted RBP9.84□□□□□ -0.83
CHD9-219ENST00000569225 KIAA1841Q6NSI8 718 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 FUT10Q6P4F1 479 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 TRAPPC11Q7Z392 1133 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 TMEM173Q86WV6 379 aaPredicted RBP9.84□□□□□ -0.83
CHD9-219ENST00000569225 LRRC52Q8N7C0 313 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 C1orf127Q8N9H9 656 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 OR5B17Q8NGF7 314 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 SPPL3Q8TCT6 385 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 POF1BQ8WVV4 589 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 RABGGTAQ92696 567 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 FAM161BQ96MY7 647 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 POP1Q99575 1024 aaKnown RBP9.84□□□□□ -0.83
CHD9-219ENST00000569225 PAAF1Q9BRP4 392 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 DNAJC25Q9H1X3 360 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 NGRNQ9NPE2 291 aaKnown RBP9.84□□□□□ -0.83
CHD9-219ENST00000569225 TLR9Q9NR96 1032 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 LMCD1Q9NZU5 365 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 SSX2IPQ9Y2D8 614 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 LAMA3Q16787 3333 aa9.84□□□□□ -0.83
CHD9-219ENST00000569225 PTPRJQ12913 1337 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 ANO9A1A5B4 782 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 EPOPA6NHQ4 379 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 PIRO00625 290 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 GRM6O15303 877 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 SOD2P04179 222 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms