RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 TRAPPC3O43617 180 aa13.89□□□□□ -0.19
CDT1-203ENST00000569140 EXOC3O60645 756 aa13.89□□□□□ -0.19
CDT1-203ENST00000569140 CLSTN1O94985 981 aa13.89□□□□□ -0.19
CDT1-203ENST00000569140 RPL9P32969 192 aaKnown RBP13.89□□□□□ -0.19
CDT1-203ENST00000569140 BRCC3P46736 316 aa13.89□□□□□ -0.19
CDT1-203ENST00000569140 ELAVL2Q12926 359 aaKnown RBP13.89□□□□□ -0.19
CDT1-203ENST00000569140 PTPN14Q15678 1187 aa13.89□□□□□ -0.19
CDT1-203ENST00000569140 CLUL1Q15846 466 aa13.89□□□□□ -0.19
CDT1-203ENST00000569140 CAMK4Q16566 473 aa13.89□□□□□ -0.19
CDT1-203ENST00000569140 DUSP6Q16828 381 aa13.89□□□□□ -0.19
CDT1-203ENST00000569140 CBWD2Q8IUF1 395 aa13.89□□□□□ -0.19
CDT1-203ENST00000569140 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDT1-203ENST00000569140 MRPL43Q8N983 215 aaKnown RBP13.89□□□□□ -0.19
CDT1-203ENST00000569140 RIN2Q8WYP3 895 aaPredicted RBP13.89□□□□□ -0.19
CDT1-203ENST00000569140 GSDMAQ96QA5 445 aa13.89□□□□□ -0.19
CDT1-203ENST00000569140 ASB7Q9H672 318 aa13.89□□□□□ -0.19
CDT1-203ENST00000569140 UBE2ZQ9H832 354 aaPredicted RBP13.89□□□□□ -0.19
CDT1-203ENST00000569140 SSX2IPQ9Y2D8 614 aa13.89□□□□□ -0.19
CDT1-203ENST00000569140 PCDHA5Q9Y5H7 936 aa13.89□□□□□ -0.19
CDT1-203ENST00000569140 H3BQ06 376 aaPredicted RBP13.88□□□□□ -0.19
CDT1-203ENST00000569140 BIN1O00499 593 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 NCK2O43639 380 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 NR3C1P04150 777 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 TMEM191BP0C7N4 346 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 KLRC2P26717 231 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 SNRPFP62306 86 aaKnown RBP13.88□□□□□ -0.19
CDT1-203ENST00000569140 TFF2Q03403 129 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 SNRNP35Q16560 246 aaKnown RBP13.88□□□□□ -0.19
CDT1-203ENST00000569140 ZNF658Q5TYW1 1059 aaPredicted RBP13.88□□□□□ -0.19
CDT1-203ENST00000569140 CEP135Q66GS9 1140 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 LMBRD2Q68DH5 695 aaPredicted RBP13.88□□□□□ -0.19
CDT1-203ENST00000569140 PRSS55Q6UWB4 352 aaPredicted RBP13.88□□□□□ -0.19
CDT1-203ENST00000569140 EFCAB13Q8IY85 973 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 XXYLT1Q8NBI6 393 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 C3orf58Q8NDZ4 430 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 PABPC5Q96DU9 382 aaKnown RBP13.88□□□□□ -0.19
CDT1-203ENST00000569140 FNBP1Q96RU3 617 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 TSPAN18Q96SJ8 248 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 CDCA3Q99618 268 aaPredicted RBP13.88□□□□□ -0.19
CDT1-203ENST00000569140 TTPALQ9BTX7 342 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 KIAA1586Q9HCI6 787 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 PDE11AQ9HCR9 933 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 CGNQ9P2M7 1197 aaKnown RBP13.88□□□□□ -0.19
CDT1-203ENST00000569140 BARX2Q9UMQ3 279 aaPredicted RBP13.88□□□□□ -0.19
CDT1-203ENST00000569140 COG5Q9UP83 839 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 DERAQ9Y315 318 aa13.88□□□□□ -0.19
CDT1-203ENST00000569140 R3HCC1Q9Y3T6 440 aaKnown RBP13.88□□□□□ -0.19
CDT1-203ENST00000569140 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.88□□□□□ -0.19
CDT1-203ENST00000569140 ANK1P16157 1881 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 FSD2A1L4K1 749 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 TMEM189-UBE2V1I3L0A0 370 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 CLASP2O75122 1294 aaKnown RBP13.87□□□□□ -0.19
CDT1-203ENST00000569140 KRT19P08727 400 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 DLATP10515 647 aaKnown RBP13.87□□□□□ -0.19
CDT1-203ENST00000569140 RPL17P18621 184 aaKnown RBP13.87□□□□□ -0.19
CDT1-203ENST00000569140 CYP3A5P20815 502 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 IGFBP6P24592 240 aaPredicted RBP13.87□□□□□ -0.19
CDT1-203ENST00000569140 TKTP29401 623 aaKnown RBP13.87□□□□□ -0.19
CDT1-203ENST00000569140 WNT7BP56706 349 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 RBM10P98175 930 aaKnown RBP13.87□□□□□ -0.19
CDT1-203ENST00000569140 DSG1Q02413 1049 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 STIM1Q13586 685 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 AAK1Q2M2I8 961 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 RTP2Q5QGT7 225 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 SPATA1Q5VX52 437 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 DSTYKQ6XUX3 929 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.87□□□□□ -0.19
CDT1-203ENST00000569140 EFHBQ8N7U6 833 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 CACTINQ8WUQ7 758 aaKnown RBP13.87□□□□□ -0.19
CDT1-203ENST00000569140 CCDC127Q96BQ5 260 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 ANKRD36BP1Q96IX9 119 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 KCTD10Q9H3F6 313 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 DPP3Q9NY33 737 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 MAN1B1Q9UKM7 699 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 C2CD2Q9Y426 696 aa13.87□□□□□ -0.19
CDT1-203ENST00000569140 TRANK1O15050 2925 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 PDXKO00764 312 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 PPEF2O14830 753 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 TBX10O75333 385 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 TNNC2P02585 160 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 ADH1AP07327 375 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 ADRB2P07550 413 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 CNPP09543 421 aaKnown RBP13.86□□□□□ -0.19
CDT1-203ENST00000569140 TNNI1P19237 187 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 LRPAP1P30533 357 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 POU5F1Q01860 360 aaKnown RBP13.86□□□□□ -0.19
CDT1-203ENST00000569140 CREMQ03060 361 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 SURF1Q15526 300 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 PSMD5Q16401 504 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 RNF168Q8IYW5 571 aaPredicted RBP13.86□□□□□ -0.19
CDT1-203ENST00000569140 GUF1Q8N442 669 aaKnown RBP13.86□□□□□ -0.19
CDT1-203ENST00000569140 FAM84AQ96KN4 292 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 KLHL5Q96PQ7 755 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 TSG101Q99816 390 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 APOL5Q9BWW9 433 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 MTMR12Q9C0I1 747 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 FRMD4BQ9Y2L6 1034 aa13.86□□□□□ -0.19
CDT1-203ENST00000569140 TEX28O15482 410 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 ITGB3P05106 788 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 NR2F2P24468 414 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms