RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 IL18RAPO95256 599 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 HARSP12081 509 aaKnown RBP7.02□□□□□ -1.29
UBR1-208ENST00000569066 IL2RBP14784 551 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 DAG1Q14118 895 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 IZUMO3Q5VZ72 239 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 APBB1IPQ7Z5R6 666 aaPredicted RBP7.02□□□□□ -1.29
UBR1-208ENST00000569066 RALYLQ86SE5 291 aaKnown RBP7.02□□□□□ -1.29
UBR1-208ENST00000569066 KLHL36Q8N4N3 616 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 GIMAP8Q8ND71 665 aaPredicted RBP7.02□□□□□ -1.29
UBR1-208ENST00000569066 DPYSL5Q9BPU6 564 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.02□□□□□ -1.29
UBR1-208ENST00000569066 ENKD1Q9H0I2 346 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 AGO3Q9H9G7 860 aaKnown RBP7.02□□□□□ -1.29
UBR1-208ENST00000569066 AS3MTQ9HBK9 375 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 TMEM233B4DJY2 109 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 FTH1P19P0C7X4 201 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 CREMQ03060 361 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 ZMAT1Q5H9K5 638 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 KBTBD2Q8IY47 623 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 CMTM4Q8IZR5 234 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 STARD7Q9NQZ5 370 aa7.02□□□□□ -1.29
UBR1-208ENST00000569066 UBE2QL1A1L167 161 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 ISM1B1AKI9 464 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 ARHGAP6O43182 974 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 C1QTNF9P0C862 333 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 CHKAP35790 457 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 RAP2BP61225 183 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 HTRA4P83105 476 aaPredicted RBP7.01□□□□□ -1.29
UBR1-208ENST00000569066 SP140Q13342 867 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 ZRSR2Q15696 482 aaKnown RBP7.01□□□□□ -1.29
UBR1-208ENST00000569066 ZNF529Q6P280 563 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 GGT6Q6P531 493 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 MYLK4Q86YV6 388 aaPredicted RBP7.01□□□□□ -1.29
UBR1-208ENST00000569066 DACT3Q96B18 629 aaPredicted RBP7.01□□□□□ -1.29
UBR1-208ENST00000569066 CNNM1Q9NRU3 951 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 MRPS18AQ9NVS2 196 aaKnown RBP7.01□□□□□ -1.29
UBR1-208ENST00000569066 FBXO34Q9NWN3 711 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 LUZP4Q9P127 313 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 AFF4Q9UHB7 1163 aaKnown RBP7.01□□□□□ -1.29
UBR1-208ENST00000569066 SMG5Q9UPR3 1016 aaKnown RBP7.01□□□□□ -1.29
UBR1-208ENST00000569066 APOL1O14791 398 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 B4GALT4O60513 344 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 FGF18O76093 207 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 MED14OSP0DP75 135 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 KCNJ5P48544 419 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 GZMKP49863 264 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 PSMC1P62191 440 aaKnown RBP7.01□□□□□ -1.29
UBR1-208ENST00000569066 SLC13A2Q13183 592 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 DACT2Q5SW24 774 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 FRMD5Q7Z6J6 570 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 TP53I13Q8NBR0 393 aaPredicted RBP7.01□□□□□ -1.29
UBR1-208ENST00000569066 ZSCAN18Q8TBC5 510 aaPredicted RBP7.01□□□□□ -1.29
UBR1-208ENST00000569066 UNKQ9C0B0 810 aaKnown RBP7.01□□□□□ -1.29
UBR1-208ENST00000569066 SMURF2Q9HAU4 748 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 TBC1D30Q9Y2I9 924 aa7.01□□□□□ -1.29
UBR1-208ENST00000569066 A0A087WV62 115 aa7□□□□□ -1.29
UBR1-208ENST00000569066 A0A1W2PPC4 97 aa7□□□□□ -1.29
UBR1-208ENST00000569066 BTN3A1O00481 513 aa7□□□□□ -1.29
UBR1-208ENST00000569066 ABHD16AO95870 558 aa7□□□□□ -1.29
UBR1-208ENST00000569066 DUSP8Q13202 625 aa7□□□□□ -1.29
UBR1-208ENST00000569066 CTBP1Q13363 440 aa7□□□□□ -1.29
UBR1-208ENST00000569066 RIN1Q13671 783 aa7□□□□□ -1.29
UBR1-208ENST00000569066 GAGE13Q4V321 117 aa7□□□□□ -1.29
UBR1-208ENST00000569066 FAM47AQ5JRC9 791 aa7□□□□□ -1.29
UBR1-208ENST00000569066 LPPQ93052 612 aa7□□□□□ -1.29
UBR1-208ENST00000569066 NDC1Q9BTX1 674 aa7□□□□□ -1.29
UBR1-208ENST00000569066 MOCS1Q9NZB8 636 aa7□□□□□ -1.29
UBR1-208ENST00000569066 NRP1O14786 923 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 B4GALT3O60512 393 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 ATP5JP18859 108 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 SLC35G1Q2M3R5 365 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 PABPC1LQ4VXU2 614 aaKnown RBP6.99□□□□□ -1.29
UBR1-208ENST00000569066 DGKKQ5KSL6 1271 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 MICU3Q86XE3 530 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 GPR135Q8IZ08 494 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 RNF169Q8NCN4 708 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 LCORQ96JN0 433 aaPredicted RBP6.99□□□□□ -1.29
UBR1-208ENST00000569066 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.99□□□□□ -1.29
UBR1-208ENST00000569066 AGAP1Q9UPQ3 857 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 LRCH1Q9Y2L9 728 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 MED16Q9Y2X0 877 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 SLC26A4O43511 780 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 PPFIA4O75335 1185 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 AFF3P51826 1226 aaKnown RBP6.99□□□□□ -1.29
UBR1-208ENST00000569066 ELF2Q15723 593 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 CSRP2Q16527 193 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 EPC1Q9H2F5 836 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 CD320Q9NPF0 282 aa6.99□□□□□ -1.29
UBR1-208ENST00000569066 CDHR4A6H8M9 788 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 GJB1P08034 283 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 NPEPPSP55786 919 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 TNFAIP2Q03169 654 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 EMC10Q5UCC4 262 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 RRAGBQ5VZM2 374 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 OTUD7BQ6GQQ9 843 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 TMED8Q6PL24 325 aaPredicted RBP6.98□□□□□ -1.29
UBR1-208ENST00000569066 PDZD4Q76G19 769 aaPredicted RBP6.98□□□□□ -1.29
UBR1-208ENST00000569066 MSLNLQ96KJ4 702 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 SIDT1Q9NXL6 827 aaKnown RBP6.98□□□□□ -1.29
UBR1-208ENST00000569066 TCAF2A6NFQ2 919 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms