RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 DUOXA2Q1HG44 320 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 LMBRD2Q68DH5 695 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-224ENST00000568877 FRMD5Q7Z6J6 570 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 SLC39A11Q8N1S5 342 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 PAAF1Q9BRP4 392 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 COLEC11Q9BWP8 271 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 ZNF576Q9H609 170 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 CERS4Q9HA82 394 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 METTL14Q9HCE5 456 aaKnown RBP18.12■□□□□ 0.49
COMMD4-224ENST00000568877 DPP3Q9NY33 737 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 SPG21Q9NZD8 308 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 ARMCX3Q9UH62 379 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-224ENST00000568877 PRG3Q9Y2Y8 225 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-224ENST00000568877 PTPRJQ12913 1337 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 LRRIQ3A6PVS8 624 aaPredicted RBP18.11■□□□□ 0.49
COMMD4-224ENST00000568877 TNNC2P02585 160 aa18.11■□□□□ 0.49
COMMD4-224ENST00000568877 TMEM191BP0C7N4 346 aa18.11■□□□□ 0.49
COMMD4-224ENST00000568877 LRPAP1P30533 357 aa18.11■□□□□ 0.49
COMMD4-224ENST00000568877 PPM1AP35813 382 aa18.11■□□□□ 0.49
COMMD4-224ENST00000568877 DLG4P78352 724 aa18.11■□□□□ 0.49
COMMD4-224ENST00000568877 UPP1Q16831 310 aa18.11■□□□□ 0.49
COMMD4-224ENST00000568877 CCDC40Q4G0X9 1142 aa18.11■□□□□ 0.49
COMMD4-224ENST00000568877 TMEM130Q8N3G9 435 aa18.11■□□□□ 0.49
COMMD4-224ENST00000568877 OR5B17Q8NGF7 314 aa18.11■□□□□ 0.49
COMMD4-224ENST00000568877 ARNTL2Q8WYA1 636 aa18.11■□□□□ 0.49
COMMD4-224ENST00000568877 RABGGTAQ92696 567 aa18.11■□□□□ 0.49
COMMD4-224ENST00000568877 ANKRD36BP1Q96IX9 119 aa18.11■□□□□ 0.49
COMMD4-224ENST00000568877 MTMR12Q9C0I1 747 aa18.11■□□□□ 0.49
COMMD4-224ENST00000568877 PODXLO00592 558 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 IKBKBO14920 756 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 AP3M2P53677 418 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 C1orf220Q5T0J3 134 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 DCLRE1AQ6PJP8 1040 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 TMEM173Q86WV6 379 aaPredicted RBP18.1■□□□□ 0.49
COMMD4-224ENST00000568877 IRF2BP1Q8IU81 584 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 KLHL23Q8NBE8 558 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 FBXO22Q8NEZ5 403 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 ZNF516Q92618 1163 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 IGSF21Q96ID5 467 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 FAM84AQ96KN4 292 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 BPIFA3Q9BQP9 254 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 THAP9Q9H5L6 903 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 MARCH5Q9NX47 278 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 NFE2L3Q9Y4A8 694 aa18.1■□□□□ 0.49
COMMD4-224ENST00000568877 TDRD15B5MCY1 1934 aaKnown RBP18.1■□□□□ 0.49
COMMD4-224ENST00000568877 ANK1P16157 1881 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 ANO9A1A5B4 782 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 F8W810 466 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 TMEM189-UBE2V1I3L0A0 370 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 TADA2AO75478 443 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 FGF18O76093 207 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 B3GAT3O94766 335 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 KIF4AO95239 1232 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 TRIM49P0CI25 452 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 TRIM49CP0CI26 452 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 ZNF165P49910 485 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 MARSP56192 900 aaKnown RBP18.09■□□□□ 0.49
COMMD4-224ENST00000568877 PLCB3Q01970 1234 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 MYL5Q02045 173 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 C9orf57Q5W0N0 161 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 C1orf127Q8N9H9 656 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 BCL7CQ8WUZ0 217 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-224ENST00000568877 TMEM169Q96HH4 297 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 C11orf84Q9BUA3 381 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-224ENST00000568877 TTYH1Q9H313 450 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-224ENST00000568877 ADAM28Q9UKQ2 775 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 ITGA11Q9UKX5 1188 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 CHD9Q3L8U1 2897 aa18.09■□□□□ 0.49
COMMD4-224ENST00000568877 TRIP11Q15643 1979 aa18.08■□□□□ 0.49
COMMD4-224ENST00000568877 TRIOBPQ9H2D6 2365 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 H3BNC9 293 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 PIRO00625 290 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 C4BPAP04003 597 aaKnown RBP18.08■□□□□ 0.48
COMMD4-224ENST00000568877 ITGB3P05106 788 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 ITGB1P05556 798 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 KRT17Q04695 432 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 GPM6BQ13491 265 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 DCAF17Q5H9S7 520 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-224ENST00000568877 ZNF697Q5TEC3 545 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 TCERG1LQ5VWI1 586 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 GPR153Q6NV75 609 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 LRSAM1Q6UWE0 723 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 TRAPPC11Q7Z392 1133 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 CREBRFQ8IUR6 639 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 FAM114A1Q8IWE2 563 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 C3orf58Q8NDZ4 430 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 CXorf38Q8TB03 319 aa18.08■□□□□ 0.48
COMMD4-224ENST00000568877 CNOT6LQ96LI5 555 aaKnown RBP18.08■□□□□ 0.48
COMMD4-224ENST00000568877 SAMSN1Q9NSI8 373 aaKnown RBP18.08■□□□□ 0.48
COMMD4-224ENST00000568877 PDCD11Q14690 1871 aaKnown RBP18.07■□□□□ 0.48
COMMD4-224ENST00000568877 KIAA1671Q9BY89 1806 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 EPOPA6NHQ4 379 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 PPEF2O14830 753 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 STX10O60499 249 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 CAVIN2O95810 425 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 KRT19P08727 400 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 IGFBP6P24592 240 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-224ENST00000568877 POLR2BP30876 1174 aaKnown RBP18.07■□□□□ 0.48
COMMD4-224ENST00000568877 GTF2H1P32780 548 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 RBP5P82980 135 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms