RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 ZMYND12Q9H0C1 365 aa13.17□□□□□ -0.3
VPS9D1-207ENST00000568691 GLT8D2Q9H1C3 349 aa13.17□□□□□ -0.3
VPS9D1-207ENST00000568691 SEPT9Q9UHD8 586 aaPredicted RBP13.17□□□□□ -0.3
VPS9D1-207ENST00000568691 NOL7Q9UMY1 257 aaKnown RBP13.17□□□□□ -0.3
VPS9D1-207ENST00000568691 KCNJ14Q9UNX9 436 aa13.17□□□□□ -0.3
VPS9D1-207ENST00000568691 MAST4O15021 2626 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 A0A1W2PQ27 194 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 A0A1W2PQ64 194 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 A0A1W2PQD8 194 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 BTBD18B2RXH4 712 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 MAN2B1O00754 1011 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 CHMP2AO43633 222 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 FOXD2O60548 495 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 PPP6R2O75170 966 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 EPN2O95208 641 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 GNA11P29992 359 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 CNR2P34972 360 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 NLRP5P59047 1200 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 FOXC1Q12948 553 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 STK38Q15208 465 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 SOWAHCQ53LP3 525 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 XKR3Q5GH77 459 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 FAM78AQ5JUQ0 283 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 PRSS36Q5K4E3 855 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 AXDND1Q5T1B0 1012 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 CCDC183Q5T5S1 534 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 PLA2G4FQ68DD2 849 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 SPEM1Q8N4L4 309 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 SLC5A5Q92911 643 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 TCEAL4Q96EI5 215 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 CXCL16Q9H2A7 254 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 ZNF334Q9HCZ1 680 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 PCDHA4Q9UN74 947 aa13.16□□□□□ -0.3
VPS9D1-207ENST00000568691 SPTLC2O15270 562 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 GADD45BO75293 160 aaPredicted RBP13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 LETM1O95202 739 aaPredicted RBP13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 RHOP08100 348 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 CCR2P41597 374 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 NPEPPSP55786 919 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 ZNF445P59923 1031 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 ORC2Q13416 577 aaPredicted RBP13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 GSE1Q14687 1217 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 SLC39A14Q15043 492 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 PSMD5Q16401 504 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 LIN9Q5TKA1 542 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 CAVIN1Q6NZI2 390 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 VITQ6UXI7 678 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 KBTBD6Q86V97 674 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 BLIDQ8IZY5 108 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 HASPINQ8TF76 798 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 PRPF31Q8WWY3 499 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 ZSWIM3Q96MP5 696 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 NXF3Q9H4D5 531 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 TRPV5Q9NQA5 729 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 DDX19AQ9NUU7 478 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 GDE1Q9NZC3 331 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 TFIP11Q9UBB9 837 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 MRPS23Q9Y3D9 190 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 COL4A3BPQ9Y5P4 624 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 PIAS3Q9Y6X2 628 aa13.15□□□□□ -0.3
VPS9D1-207ENST00000568691 CYSRT1A8MQ03 144 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 M0R2N6 131 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 TSPAN1O60635 241 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 XYLBO75191 536 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 MOSPD3O75425 235 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 PSMD10O75832 226 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 KIF4AO95239 1232 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 CAPNS1P04632 268 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 AKAP5P24588 427 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 CCNE1P24864 410 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 HOXA6P31267 233 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 DNM2P50570 870 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 ZNF252P-AS1Q0IIN9 211 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 NR5A1Q13285 461 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 RAB33AQ14088 237 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 PPP2R5DQ14738 602 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 AMHR2Q16671 573 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 ADALQ6DHV7 355 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 TXNDC11Q6PKC3 985 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 WDR5BQ86VZ2 330 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 TMEM143Q96AN5 459 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 RSPRY1Q96DX4 576 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 CPB2Q96IY4 423 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 RIT2Q99578 217 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 TTPALQ9BTX7 342 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 SCNM1Q9BWG6 230 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 APOL6Q9BWW8 343 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 BRD9Q9H8M2 597 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 C6orf50Q9HD87 102 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 UBN1Q9NPG3 1134 aa13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 AVENQ9NQS1 362 aaPredicted RBP13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 WRAP73Q9P2S5 460 aaPredicted RBP13.14□□□□□ -0.31
VPS9D1-207ENST00000568691 VWA8A3KMH1 1905 aa13.13□□□□□ -0.31
VPS9D1-207ENST00000568691 TICRRQ7Z2Z1 1910 aa13.13□□□□□ -0.31
VPS9D1-207ENST00000568691 BPTFQ12830 3046 aa13.13□□□□□ -0.31
VPS9D1-207ENST00000568691 TMEM8BA6NDV4 472 aa13.13□□□□□ -0.31
VPS9D1-207ENST00000568691 SRGAP2CP0DJJ0 459 aa13.13□□□□□ -0.31
VPS9D1-207ENST00000568691 ME1P48163 572 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms