RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PTPRHQ9HD43 1115 aa17.02■□□□□ 0.32
NME3-211ENST00000568561 TOPORSQ9NS56 1045 aaPredicted RBP17.02■□□□□ 0.32
NME3-211ENST00000568561 KCNH3Q9ULD8 1083 aa17.02■□□□□ 0.32
NME3-211ENST00000568561 PCDHB6Q9Y5E3 794 aa17.02■□□□□ 0.32
NME3-211ENST00000568561 COL4A2P08572 1712 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 F5P12259 2224 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 FAM170BA6NMN3 283 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 NRG2O14511 850 aaPredicted RBP17.01■□□□□ 0.31
NME3-211ENST00000568561 PRRG1O14668 218 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 TRAPPC10P48553 1259 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 RAD51AP2Q09MP3 1159 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 MAPK7Q13164 816 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 PTGDRQ13258 359 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 DMP1Q13316 513 aaPredicted RBP17.01■□□□□ 0.31
NME3-211ENST00000568561 IL17AQ16552 155 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 SEZ6Q53EL9 994 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 ALKAL1Q6UXT8 129 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 IGSF22Q8N9C0 903 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 FAM184AQ8NB25 1140 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 RMDN1Q96DB5 314 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 TCEAL4Q96EI5 215 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 CORO1BQ9BR76 489 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 MRPL4Q9BYD3 311 aaKnown RBP17.01■□□□□ 0.31
NME3-211ENST00000568561 BCO2Q9BYV7 579 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 LTB4R2Q9NPC1 389 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 KMT5AQ9NQR1 393 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 PPP4R2Q9NY27 417 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 ARHGAP28Q9P2N2 729 aa17.01■□□□□ 0.31
NME3-211ENST00000568561 SFI1A8K8P3 1242 aa17■□□□□ 0.31
NME3-211ENST00000568561 ABLIM1O14639 778 aa17■□□□□ 0.31
NME3-211ENST00000568561 SLC16A4O15374 487 aa17■□□□□ 0.31
NME3-211ENST00000568561 SEC24AO95486 1093 aa17■□□□□ 0.31
NME3-211ENST00000568561 LRG1P02750 347 aa17■□□□□ 0.31
NME3-211ENST00000568561 PRKCQQ04759 706 aa17■□□□□ 0.31
NME3-211ENST00000568561 GRM2Q14416 872 aa17■□□□□ 0.31
NME3-211ENST00000568561 ZRSR1Q15695 479 aaKnown RBP17■□□□□ 0.31
NME3-211ENST00000568561 XKR4Q5GH76 650 aa17■□□□□ 0.31
NME3-211ENST00000568561 TANGO2Q6ICL3 276 aa17■□□□□ 0.31
NME3-211ENST00000568561 SLC8B1Q6J4K2 584 aa17■□□□□ 0.31
NME3-211ENST00000568561 ERMP1Q7Z2K6 904 aa17■□□□□ 0.31
NME3-211ENST00000568561 ZNF461Q8TAF7 563 aa17■□□□□ 0.31
NME3-211ENST00000568561 ZBTB45Q96K62 511 aaPredicted RBP17■□□□□ 0.31
NME3-211ENST00000568561 TCHPQ9BT92 498 aa17■□□□□ 0.31
NME3-211ENST00000568561 CYP4F11Q9HBI6 524 aa17■□□□□ 0.31
NME3-211ENST00000568561 HEBP1Q9NRV9 189 aa17■□□□□ 0.31
NME3-211ENST00000568561 ANKFY1Q9P2R3 1169 aa17■□□□□ 0.31
NME3-211ENST00000568561 DNM3Q9UQ16 869 aa17■□□□□ 0.31
NME3-211ENST00000568561 NUB1Q9Y5A7 615 aa17■□□□□ 0.31
NME3-211ENST00000568561 SPTBN2O15020 2390 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 ARHGEF37A1IGU5 675 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 LAMTOR5O43504 91 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 ECI2O75521 394 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 ABLIM3O94929 683 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 MCF2P10911 925 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 PROZP22891 400 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 FCARP24071 287 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 TARSP26639 723 aaKnown RBP16.99■□□□□ 0.31
NME3-211ENST00000568561 ELF1P32519 619 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 HMGN5P82970 282 aaKnown RBP16.99■□□□□ 0.31
NME3-211ENST00000568561 PFKPQ01813 784 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 CSTF1Q05048 431 aaKnown RBP16.99■□□□□ 0.31
NME3-211ENST00000568561 PDIA5Q14554 519 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 KRT79Q5XKE5 535 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 RINT1Q6NUQ1 792 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 MPZL3Q6UWV2 235 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 DRC1Q96MC2 740 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 ACAP3Q96P50 834 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 MMTAG2Q9BU76 263 aaKnown RBP16.99■□□□□ 0.31
NME3-211ENST00000568561 TMEM134Q9H6X4 195 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 SLC38A7Q9NVC3 462 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 TUBGCP4Q9UGJ1 667 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 FBXL5Q9UKA1 691 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 INSL5Q9Y5Q6 135 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 ANK1P16157 1881 aa16.99■□□□□ 0.31
NME3-211ENST00000568561 TBC1D4O60343 1298 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 KCNE1P15382 129 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 PTPN2P17706 415 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 MCM4P33991 863 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 CCR2P41597 374 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 CTXN3Q4LDR2 81 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 PRSS36Q5K4E3 855 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 TSSK4Q6SA08 328 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 C1orf186Q6ZWK4 172 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 SUMF1Q8NBK3 374 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 RUBCNQ92622 972 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 PLIN2Q99541 437 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 RAB34Q9BZG1 259 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 GDE1Q9NZC3 331 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 CNTN3Q9P232 1028 aa16.98■□□□□ 0.31
NME3-211ENST00000568561 SHISA7A6NL88 538 aa16.97■□□□□ 0.31
NME3-211ENST00000568561 SYN3O14994 580 aa16.97■□□□□ 0.31
NME3-211ENST00000568561 KINO60870 393 aaKnown RBP16.97■□□□□ 0.31
NME3-211ENST00000568561 ATF2P15336 505 aa16.97■□□□□ 0.31
NME3-211ENST00000568561 U2AF2P26368 475 aaKnown RBP eCLIP16.97■□□□□ 0.31
NME3-211ENST00000568561 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
NME3-211ENST00000568561 SPAG1Q07617 926 aa16.97■□□□□ 0.31
NME3-211ENST00000568561 FAM78AQ5JUQ0 283 aa16.97■□□□□ 0.31
NME3-211ENST00000568561 ZBTB41Q5SVQ8 909 aa16.97■□□□□ 0.31
NME3-211ENST00000568561 RTL10Q7L3V2 364 aa16.97■□□□□ 0.31
NME3-211ENST00000568561 TCEAL8Q8IYN2 117 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms