RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 TAP1Q03518 808 aa16.1■□□□□ 0.17
KLHDC4-223ENST00000568499 CETN1Q12798 172 aa16.1■□□□□ 0.17
KLHDC4-223ENST00000568499 BIRC3Q13489 604 aa16.1■□□□□ 0.17
KLHDC4-223ENST00000568499 TRPC3Q13507 836 aa16.1■□□□□ 0.17
KLHDC4-223ENST00000568499 BMS1Q14692 1282 aaKnown RBP16.1■□□□□ 0.17
KLHDC4-223ENST00000568499 DCAF17Q5H9S7 520 aaPredicted RBP16.1■□□□□ 0.17
KLHDC4-223ENST00000568499 C18orf25Q96B23 403 aaPredicted RBP16.1■□□□□ 0.17
KLHDC4-223ENST00000568499 TMEM169Q96HH4 297 aa16.1■□□□□ 0.17
KLHDC4-223ENST00000568499 CNOT6LQ96LI5 555 aaKnown RBP16.1■□□□□ 0.17
KLHDC4-223ENST00000568499 C11orf84Q9BUA3 381 aaPredicted RBP16.1■□□□□ 0.17
KLHDC4-223ENST00000568499 CXCL16Q9H2A7 254 aa16.1■□□□□ 0.17
KLHDC4-223ENST00000568499 DNAJB4Q9UDY4 337 aa16.1■□□□□ 0.17
KLHDC4-223ENST00000568499 PUF60Q9UHX1 559 aaKnown RBP16.1■□□□□ 0.17
KLHDC4-223ENST00000568499 LRRIQ3A6PVS8 624 aaPredicted RBP16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 GOLGA6L19H0YKK7 550 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 PODXLO00592 558 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 NRP1O14786 923 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 TRAPPC3O43617 180 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 N4BP1O75113 896 aaKnown RBP16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 B3GAT3O94766 335 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 KRT19P08727 400 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 PRKCSHP14314 528 aaPredicted RBP16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 CDK11BP21127 795 aaKnown RBP16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 EEF1GP26641 437 aaKnown RBP16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 LRPAP1P30533 357 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 PNPLA4P41247 253 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 SLC11A1P49279 550 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 MARSP56192 900 aaKnown RBP16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 ZNF445P59923 1031 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 CLDN10P78369 228 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 RBP5P82980 135 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 NAB2Q15742 525 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 EFCAB13Q8IY85 973 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 AOPEPQ8N6M6 819 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 CCDC150Q8NCX0 1101 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 BORCS6Q96GS4 357 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 ZNF560Q96MR9 790 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 MED15Q96RN5 788 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 POP1Q99575 1024 aaKnown RBP16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 MTMR12Q9C0I1 747 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 TUBGCP4Q9UGJ1 667 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 PRG3Q9Y2Y8 225 aaPredicted RBP16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 NUB1Q9Y5A7 615 aa16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.09■□□□□ 0.17
KLHDC4-223ENST00000568499 ARHGEF37A1IGU5 675 aa16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 CLSTN1O94985 981 aa16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 CLCNKBP51801 687 aa16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 ELAVL2Q12926 359 aaKnown RBP16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 MYO1EQ12965 1108 aa16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 UPP1Q16831 310 aa16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 EPC2Q52LR7 807 aa16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 LMBRD2Q68DH5 695 aaPredicted RBP16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 TRAPPC11Q7Z392 1133 aa16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 FBXO22Q8NEZ5 403 aa16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 FAM200AQ8TCP9 573 aa16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 C17orf80Q9BSJ5 609 aa16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 GOLGA2P5Q9HBQ8 144 aa16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 TMEM8AQ9HCN3 771 aa16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 MTUS1Q9ULD2 1270 aa16.08■□□□□ 0.16
KLHDC4-223ENST00000568499 CITO14578 2027 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 KCNJ18B7U540 433 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 C5orf67F2Z3F1 127 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 TMEM189-UBE2V1I3L0A0 370 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 ITGB3P05106 788 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 TRIM49P0CI25 452 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 TRIM49CP0CI26 452 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 WNT7BP56706 349 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 MCCD1P59942 119 aaPredicted RBP16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 DLG4P78352 724 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 UBE3AQ05086 875 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 SOX4Q06945 474 aaPredicted RBP16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 KCNJ12Q14500 433 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 ZNF697Q5TEC3 545 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 C9orf57Q5W0N0 161 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 KRT39Q6A163 491 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 SLC39A11Q8N1S5 342 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 C1orf127Q8N9H9 656 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 OR5B17Q8NGF7 314 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 ARNTL2Q8WYA1 636 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 IGSF21Q96ID5 467 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 IMPG2Q9BZV3 1241 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 ZNF576Q9H609 170 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 MMRN2Q9H8L6 949 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 SAMSN1Q9NSI8 373 aaKnown RBP16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 FANCLQ9NW38 375 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 HCSTQ9UBK5 93 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 ADAM28Q9UKQ2 775 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 AGAP1Q9UPQ3 857 aa16.07■□□□□ 0.16
KLHDC4-223ENST00000568499 PTPRSQ13332 1948 aa16.06■□□□□ 0.16
KLHDC4-223ENST00000568499 FNDC1Q4ZHG4 1894 aaPredicted RBP16.06■□□□□ 0.16
KLHDC4-223ENST00000568499 SF3B1O75533 1304 aaKnown RBP eCLIP16.06■□□□□ 0.167e-8■■■■■ 30.2
KLHDC4-223ENST00000568499 NT5C1B-RDH14C9J2C7 533 aa16.06■□□□□ 0.16
KLHDC4-223ENST00000568499 PIRO00625 290 aa16.06■□□□□ 0.16
KLHDC4-223ENST00000568499 FGF18O76093 207 aa16.06■□□□□ 0.16
KLHDC4-223ENST00000568499 C4BPAP04003 597 aaKnown RBP16.06■□□□□ 0.16
KLHDC4-223ENST00000568499 POLR2BP30876 1174 aaKnown RBP16.06■□□□□ 0.16
KLHDC4-223ENST00000568499 ATICP31939 592 aa16.06■□□□□ 0.16
KLHDC4-223ENST00000568499 GCLMP48507 274 aa16.06■□□□□ 0.16
KLHDC4-223ENST00000568499 TAF6P49848 677 aa16.06■□□□□ 0.16
KLHDC4-223ENST00000568499 MXI1P50539 228 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms