RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 IMPG2Q9BZV3 1241 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 INO80BQ9C086 356 aaPredicted RBP19.42■□□□□ 0.7
SMPD3-211ENST00000568373 PTPRHQ9HD43 1115 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 CNOT8Q9UFF9 292 aaKnown RBP19.42■□□□□ 0.7
SMPD3-211ENST00000568373 NFU1Q9UMS0 254 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 CNTN6Q9UQ52 1028 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 SURF1Q15526 300 aa19.41■□□□□ 0.7
SMPD3-211ENST00000568373 ATF7IP2Q5U623 682 aa19.41■□□□□ 0.7
SMPD3-211ENST00000568373 TMEM270Q6UE05 265 aa19.41■□□□□ 0.7
SMPD3-211ENST00000568373 KRT35Q92764 455 aa19.41■□□□□ 0.7
SMPD3-211ENST00000568373 EMID1Q96A84 441 aaPredicted RBP19.41■□□□□ 0.7
SMPD3-211ENST00000568373 ZNF668Q96K58 619 aaPredicted RBP19.41■□□□□ 0.7
SMPD3-211ENST00000568373 KATNBL1Q9H079 304 aa19.41■□□□□ 0.7
SMPD3-211ENST00000568373 WNT8AQ9H1J5 351 aa19.41■□□□□ 0.7
SMPD3-211ENST00000568373 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.41■□□□□ 0.7
SMPD3-211ENST00000568373 PCDHB4Q9Y5E5 795 aa19.41■□□□□ 0.7
SMPD3-211ENST00000568373 UMODL1Q5DID0 1318 aa19.41■□□□□ 0.7
SMPD3-211ENST00000568373 ASS1P00966 412 aaKnown RBP19.4■□□□□ 0.7
SMPD3-211ENST00000568373 INSRRP14616 1297 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 MBTD1Q05BQ5 628 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 CD101Q93033 1021 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 NFKBIZQ9BYH8 718 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 MTMR12Q9C0I1 747 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 B4GALT5O43286 388 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 CLSTN1O94985 981 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 CYP1A1P04798 512 aaPredicted RBP19.4■□□□□ 0.7
SMPD3-211ENST00000568373 IGBP1P78318 339 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 CENPCQ03188 943 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 ZNF211Q13398 564 aaPredicted RBP19.4■□□□□ 0.7
SMPD3-211ENST00000568373 DUOXA2Q1HG44 320 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 ZNF568Q3ZCX4 644 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 MCOLN2Q8IZK6 566 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 EIF1ADQ8N9N8 165 aaKnown RBP19.4■□□□□ 0.7
SMPD3-211ENST00000568373 AFG1LQ8WV93 481 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 FAM212AQ96EL1 285 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 TRIM11Q96F44 468 aa19.4■□□□□ 0.7
SMPD3-211ENST00000568373 GBA2Q9HCG7 927 aaPredicted RBP19.4■□□□□ 0.7
SMPD3-211ENST00000568373 AVENQ9NQS1 362 aaPredicted RBP19.4■□□□□ 0.7
SMPD3-211ENST00000568373 SYF2O95926 243 aaKnown RBP19.39■□□□□ 0.69
SMPD3-211ENST00000568373 CST3P01034 146 aaPredicted RBP19.39■□□□□ 0.69
SMPD3-211ENST00000568373 MYBL1P10243 752 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 GNA15P30679 374 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 ADCYAP1R1P41586 468 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 MARCKSL1P49006 195 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 PEX5P50542 639 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 SCARA3Q6AZY7 606 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 TRIM72Q6ZMU5 477 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 MAATS1Q7Z4T9 603 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 RBBP8NLQ8NC74 664 aaPredicted RBP19.39■□□□□ 0.69
SMPD3-211ENST00000568373 CCDC26Q8TAB7 109 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 BTBD6Q96KE9 485 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 MINDY3Q9H8M7 445 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 VPS18Q9P253 973 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 AMACRQ9UHK6 382 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 GOLGA6BA6NDN3 693 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 BHMG1C9JSJ3 638 aaPredicted RBP19.39■□□□□ 0.69
SMPD3-211ENST00000568373 SPOPO43791 374 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 SNAI1O95863 264 aaPredicted RBP19.39■□□□□ 0.69
SMPD3-211ENST00000568373 HOXC6P09630 235 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 NSFP46459 744 aaKnown RBP19.39■□□□□ 0.69
SMPD3-211ENST00000568373 POU5F1BQ06416 359 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 TRADDQ15628 312 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 PPP2R5EQ16537 467 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 NAA35Q5VZE5 725 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 GPR142Q7Z601 462 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 CPA5Q8WXQ8 436 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.39■□□□□ 0.69
SMPD3-211ENST00000568373 TNFSF13BQ9Y275 285 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 FAN1Q9Y2M0 1017 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 NR2E1Q9Y466 385 aa19.39■□□□□ 0.69
SMPD3-211ENST00000568373 GOLGA6L10A0A0M3HER8 536 aa19.38■□□□□ 0.69
SMPD3-211ENST00000568373 AGPSO00116 658 aa19.38■□□□□ 0.69
SMPD3-211ENST00000568373 MAGEB2O15479 319 aa19.38■□□□□ 0.69
SMPD3-211ENST00000568373 CTNNA1P35221 906 aaKnown RBP19.38■□□□□ 0.69
SMPD3-211ENST00000568373 GGCXP38435 758 aa19.38■□□□□ 0.69
SMPD3-211ENST00000568373 PHKA2P46019 1235 aa19.38■□□□□ 0.69
SMPD3-211ENST00000568373 CUL1Q13616 776 aa19.38■□□□□ 0.69
SMPD3-211ENST00000568373 GRB14Q14449 540 aa19.38■□□□□ 0.69
SMPD3-211ENST00000568373 TMEM132AQ24JP5 1023 aa19.38■□□□□ 0.69
SMPD3-211ENST00000568373 EEF1DP3Q658K8 133 aa19.38■□□□□ 0.69
SMPD3-211ENST00000568373 THNSL1Q8IYQ7 743 aa19.38■□□□□ 0.69
SMPD3-211ENST00000568373 UBR7Q8N806 425 aa19.38■□□□□ 0.69
SMPD3-211ENST00000568373 CYFIP2Q96F07 1278 aa19.38■□□□□ 0.69
SMPD3-211ENST00000568373 IFT122Q9HBG6 1241 aa19.38■□□□□ 0.69
SMPD3-211ENST00000568373 PRMT7Q9NVM4 692 aaPredicted RBP19.38■□□□□ 0.69
SMPD3-211ENST00000568373 ZSWIM8A7E2V4 1837 aa19.38■□□□□ 0.69
SMPD3-211ENST00000568373 CCDC66A2RUB6 948 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 FAM153BP0C7A2 387 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 IQCF3P0C7M6 154 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 ZNF286BP0CG31 522 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 CTNNA2P26232 953 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 ZNF132P52740 706 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 MYL6P60660 151 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 POU5F1Q01860 360 aaKnown RBP19.37■□□□□ 0.69
SMPD3-211ENST00000568373 FAM153CQ494X1 144 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 DPP9Q86TI2 863 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 LINC01465Q8N7H1 131 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 WHAMMQ8TF30 809 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 PARK7Q99497 189 aaKnown RBP19.37■□□□□ 0.69
SMPD3-211ENST00000568373 CDT1Q9H211 546 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms