RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 PAWRQ96IZ0 340 aaKnown RBP8.55□□□□□ -1.04
SMG1-214ENST00000568038 C7orf25Q9BPX7 421 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 FAM83CQ9BQN1 747 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 REEP2Q9BRK0 252 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 TRIM9Q9C026 710 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 C11orf49Q9H6J7 331 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 DHX33Q9H6R0 707 aaKnown RBP8.55□□□□□ -1.04
SMG1-214ENST00000568038 LIN7BQ9HAP6 207 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 GPRC5CQ9NQ84 441 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 XPNPEP1Q9NQW7 623 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 PDLIM7Q9NR12 457 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 HOOK1Q9UJC3 728 aaKnown RBP8.55□□□□□ -1.04
SMG1-214ENST00000568038 TUBE1Q9UJT0 475 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 LOC100289279A0A1B0GTE1 492 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 MBLAC1A4D2B0 266 aaPredicted RBP8.54□□□□□ -1.04
SMG1-214ENST00000568038 CCDC85CA6NKD9 419 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 TBCAO75347 108 aaKnown RBP8.54□□□□□ -1.04
SMG1-214ENST00000568038 MAFO75444 373 aaPredicted RBP8.54□□□□□ -1.04
SMG1-214ENST00000568038 CYP2C9P11712 490 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 GUCY2CP25092 1073 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 TMOD1P28289 359 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 DNM2P50570 870 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 ADAM17P78536 824 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 DRP2Q13474 957 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 PTGISQ16647 500 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 SGO2Q562F6 1265 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 CCDC183Q5T5S1 534 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 SLC39A5Q6ZMH5 540 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 RUFY4Q6ZNE9 571 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 NECAB2Q7Z6G3 386 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 SESTD1Q86VW0 696 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 ZDHHC13Q8IUH4 622 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 EXOC8Q8IYI6 725 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 RETREG2Q8NC44 543 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 MCPH1Q8NEM0 835 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 SYAP1Q96A49 352 aaPredicted RBP8.54□□□□□ -1.04
SMG1-214ENST00000568038 DNAJC19Q96DA6 116 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 ZNF668Q96K58 619 aaPredicted RBP8.54□□□□□ -1.04
SMG1-214ENST00000568038 PPP1R16BQ96T49 567 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 JPH2Q9BR39 696 aaPredicted RBP8.54□□□□□ -1.04
SMG1-214ENST00000568038 KRTAP4-8Q9BYQ9 185 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 FAM49AQ9H0Q0 323 aaPredicted RBP8.54□□□□□ -1.04
SMG1-214ENST00000568038 TRPV6Q9H1D0 765 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 POLR3FQ9H1D9 316 aaPredicted RBP8.54□□□□□ -1.04
SMG1-214ENST00000568038 TRMT13Q9NUP7 481 aaKnown RBP8.54□□□□□ -1.04
SMG1-214ENST00000568038 PANK4Q9NVE7 773 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 KCND2Q9NZV8 630 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 SUCLA2Q9P2R7 463 aaPredicted RBP8.54□□□□□ -1.04
SMG1-214ENST00000568038 PCDHA5Q9Y5H7 936 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 PCDHA2Q9Y5H9 948 aa8.54□□□□□ -1.04
SMG1-214ENST00000568038 TRIP12Q14669 1992 aaPredicted RBP8.53□□□□□ -1.04
SMG1-214ENST00000568038 KIAA0100Q14667 2235 aaKnown RBP8.53□□□□□ -1.04
SMG1-214ENST00000568038 EVPLQ92817 2033 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 ARID2Q68CP9 1835 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 A0A096LPE4 126 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 IGKV6-21A0A0C4DH24 114 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 A0A1W2PPZ6 126 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 MEGF11A6BM72 1044 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 BIN1O00499 593 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 NDUFB5O43674 189 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 B4GALT4O60513 344 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 SMC2O95347 1197 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 DLGAP3O95886 979 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 VTNP04004 478 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 RPN1P04843 607 aaKnown RBP8.53□□□□□ -1.04
SMG1-214ENST00000568038 MYL1P05976 194 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 COL6A1P12109 1028 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 DRD2P14416 443 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 CAPN2P17655 700 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 HOXC8P31273 242 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 CDK7P50613 346 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 PTPN11Q06124 597 aaPredicted RBP8.53□□□□□ -1.04
SMG1-214ENST00000568038 COASYQ13057 564 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 MAPK7Q13164 816 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 TRIM60Q495X7 471 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 HERC4Q5GLZ8 1057 aaPredicted RBP8.53□□□□□ -1.04
SMG1-214ENST00000568038 ISM2Q6H9L7 571 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 SFR1Q86XK3 245 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 RHPN2Q8IUC4 686 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 GALNT12Q8IXK2 581 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 CCDC65Q8IXS2 484 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 ELOA2Q8IYF1 753 aaPredicted RBP8.53□□□□□ -1.04
SMG1-214ENST00000568038 KIAA0319LQ8IZA0 1049 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 DAW1Q8N136 415 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 MYCT1Q8N699 235 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 SLC43A3Q8NBI5 491 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 DNAJB3Q8WWF6 145 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 TCP11Q8WWU5 503 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 PSPC1Q8WXF1 523 aaKnown RBP8.53□□□□□ -1.04
SMG1-214ENST00000568038 KIFAP3Q92845 792 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 SMARCE1Q969G3 411 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 DRC1Q96MC2 740 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 CTAGE1Q96RT6 745 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 MAP7D2Q96T17 732 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 TIPINQ9BVW5 301 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 CYP4F12Q9HCS2 524 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 EXOC1Q9NV70 894 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 TBC1D7Q9P0N9 293 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 ODF2LQ9ULJ1 636 aa8.53□□□□□ -1.04
SMG1-214ENST00000568038 AKT3Q9Y243 479 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms