RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 SLC10A6Q3KNW5 377 aa16.45■□□□□ 0.22
SCAMP2-209ENST00000567638 SEZ6Q53EL9 994 aa16.45■□□□□ 0.22
SCAMP2-209ENST00000567638 VARS2Q5ST30 1063 aaKnown RBP16.45■□□□□ 0.22
SCAMP2-209ENST00000567638 RTL10Q7L3V2 364 aa16.45■□□□□ 0.22
SCAMP2-209ENST00000567638 LRRC15Q8TF66 581 aa16.45■□□□□ 0.22
SCAMP2-209ENST00000567638 KCNN1Q92952 543 aa16.45■□□□□ 0.22
SCAMP2-209ENST00000567638 REEP2Q9BRK0 252 aa16.45■□□□□ 0.22
SCAMP2-209ENST00000567638 CDH7Q9ULB5 785 aa16.45■□□□□ 0.22
SCAMP2-209ENST00000567638 POLIQ9UNA4 740 aa16.45■□□□□ 0.22
SCAMP2-209ENST00000567638 NUMBLQ9Y6R0 609 aa16.45■□□□□ 0.22
SCAMP2-209ENST00000567638 SYN3O14994 580 aa16.44■□□□□ 0.22
SCAMP2-209ENST00000567638 CLDN3O15551 220 aa16.44■□□□□ 0.22
SCAMP2-209ENST00000567638 LONP1P36776 959 aaKnown RBP16.44■□□□□ 0.22
SCAMP2-209ENST00000567638 ROR1Q01973 937 aa16.44■□□□□ 0.22
SCAMP2-209ENST00000567638 GRIN1Q05586 938 aa16.44■□□□□ 0.22
SCAMP2-209ENST00000567638 SLC8B1Q6J4K2 584 aa16.44■□□□□ 0.22
SCAMP2-209ENST00000567638 HAUS6Q7Z4H7 955 aa16.44■□□□□ 0.22
SCAMP2-209ENST00000567638 GPBP1Q86WP2 473 aa16.44■□□□□ 0.22
SCAMP2-209ENST00000567638 BLOC1S4Q9NUP1 217 aa16.44■□□□□ 0.22
SCAMP2-209ENST00000567638 NUB1Q9Y5A7 615 aa16.44■□□□□ 0.22
SCAMP2-209ENST00000567638 TSC2P49815 1807 aa16.44■□□□□ 0.22
SCAMP2-209ENST00000567638 WDR27A2RRH5 827 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 KRBA1A5PL33 1030 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 PI15O43692 258 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 CXCL8P10145 99 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 PLCG1P19174 1290 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 MATR3P43243 847 aaKnown RBP eCLIP16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 ZNF131P52739 623 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 CUL4AQ13619 759 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 DHX8Q14562 1220 aaKnown RBP16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 SF3A1Q15459 793 aaKnown RBP16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 ZNF461Q8TAF7 563 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 ITFG1Q8TB96 612 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 GPR152Q8TDT2 470 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 FGF13Q92913 245 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 BICD1Q96G01 975 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 RTP3Q9BQQ7 232 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 HAPLN2Q9GZV7 340 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 PLEKHA5Q9HAU0 1116 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 SLC2A4RGQ9NR83 387 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 HCFC1R1Q9NWW0 138 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 TUBGCP4Q9UGJ1 667 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 CA14Q9ULX7 337 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 TCHHQ07283 1943 aa16.43■□□□□ 0.22
SCAMP2-209ENST00000567638 H7C4K7 107 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 K7ENM7 598 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 TBC1D4O60343 1298 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 ABLIM3O94929 683 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 CLTAP09496 248 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 SCP2P22307 547 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 MCM4P33991 863 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 LIG4P49917 911 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 MRPL58Q14197 206 aaKnown RBP16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 MCM6Q14566 821 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 KARSQ15046 597 aaKnown RBP16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 PABPC1LQ4VXU2 614 aaKnown RBP16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 PARM1Q6UWI2 310 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 MTSS1LQ765P7 747 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 CCDC105Q8IYK2 499 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 MYCT1Q8N699 235 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 ST13P5Q8NFI4 369 aaPredicted RBP16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 RASSF8Q8NHQ8 419 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 RAD54LQ92698 747 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 FGF14Q92915 247 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 SUSD3Q96L08 255 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 PARVGQ9HBI0 331 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 DNMT3BQ9UBC3 853 aaKnown RBP16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 KCNH3Q9ULD8 1083 aa16.42■□□□□ 0.22
SCAMP2-209ENST00000567638 TTC26A0AVF1 554 aa16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 ARHGEF37A1IGU5 675 aa16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 VPS37CA5D8V6 355 aaPredicted RBP16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 HNRNPDLO14979 420 aaKnown RBP16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 FAM13AO94988 1023 aa16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 PIGRP01833 764 aa16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 RFX1P22670 979 aa16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 TNFSF9P41273 254 aa16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 KYAT1Q16773 422 aa16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 NPAS3Q8IXF0 933 aa16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 DDX12PQ92771 950 aa16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 RPP25Q9BUL9 199 aaKnown RBP16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 ARHGEF3Q9NR81 526 aa16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 FBXL5Q9UKA1 691 aa16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 TBX20Q9UMR3 447 aa16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.41■□□□□ 0.22
SCAMP2-209ENST00000567638 PROB1E7EW31 1015 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 STK25O00506 426 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 PRRG1O14668 218 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 TRAK2O60296 914 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 FAM189A1O60320 539 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 GFRA3O60609 400 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 TBCAO75347 108 aaKnown RBP16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 LRG1P02750 347 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 KRT18P05783 430 aaKnown RBP16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 ATF2P15336 505 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 PDCP20941 246 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 LRPAP1P30533 357 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 ELF1P32519 619 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 NBL1P41271 181 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 ARPP19P56211 112 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 PPP2R3AQ06190 1150 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms