RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 PTPN14Q15678 1187 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 ZNF658Q5TYW1 1059 aaPredicted RBP13.48□□□□□ -0.25
RNF40-211ENST00000567365 JADE1Q6IE81 842 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 NT5DC4Q86YG4 428 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 CBWD2Q8IUF1 395 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 SMYD4Q8IYR2 804 aaPredicted RBP13.48□□□□□ -0.25
RNF40-211ENST00000567365 CXorf38Q8TB03 319 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 GOLGA5Q8TBA6 731 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 SMARCE1Q969G3 411 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 CCDC47Q96A33 483 aaKnown RBP13.48□□□□□ -0.25
RNF40-211ENST00000567365 DDX27Q96GQ7 796 aaKnown RBP13.48□□□□□ -0.25
RNF40-211ENST00000567365 RMND1Q9NWS8 449 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 MAN1B1Q9UKM7 699 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 SCN1AP35498 2009 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 PTPRJQ12913 1337 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.47□□□□□ -0.25
RNF40-211ENST00000567365 IL18RAPO95256 599 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 SMC2O95347 1197 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 COL9A1P20849 921 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 GTF2F1P35269 517 aaKnown RBP eCLIP13.47□□□□□ -0.25
RNF40-211ENST00000567365 LTBRP36941 435 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 PRCPP42785 496 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 GUCY2FP51841 1108 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 MORC3Q14149 939 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 MYBPC2Q14324 1141 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 SMC1AQ14683 1233 aaKnown RBP13.47□□□□□ -0.25
RNF40-211ENST00000567365 DUSP6Q16828 381 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 PLPP4Q5VZY2 271 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 XXYLT1Q8NBI6 393 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 AUTS2Q8WXX7 1259 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 KIF12Q96FN5 646 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 MFSD14AQ96MC6 490 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 GBP4Q96PP9 640 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 ASB2Q96Q27 587 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 RXFP1Q9HBX9 757 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 KIAA1586Q9HCI6 787 aa13.47□□□□□ -0.25
RNF40-211ENST00000567365 RBAKQ9NYW8 714 aaPredicted RBP13.47□□□□□ -0.25
RNF40-211ENST00000567365 HOOK1Q9UJC3 728 aaKnown RBP13.47□□□□□ -0.25
RNF40-211ENST00000567365 SF3B1O75533 1304 aaKnown RBP eCLIP13.46□□□□□ -0.25
RNF40-211ENST00000567365 ZNF233A6NK53 670 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 PODXLO00592 558 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 PIRO00625 290 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 PPEF2O14830 753 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 B3GAT3O94766 335 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 CXCL14O95715 111 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 GLP2RO95838 553 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 FGFR3P22607 806 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 TMEM132DQ14C87 1099 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 SNRNP35Q16560 246 aaKnown RBP13.46□□□□□ -0.25
RNF40-211ENST00000567365 RTP2Q5QGT7 225 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 CENPPQ6IPU0 288 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 TMEM184AQ6ZMB5 413 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 TMC7Q7Z402 723 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 ZC3H3Q8IXZ2 948 aaKnown RBP13.46□□□□□ -0.25
RNF40-211ENST00000567365 ADSSL1Q8N142 457 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 MICALL1Q8N3F8 863 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 VN1R2Q8NFZ6 395 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 PLEKHO2Q8TD55 490 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 HASPINQ8TF76 798 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 PABPC5Q96DU9 382 aaKnown RBP13.46□□□□□ -0.25
RNF40-211ENST00000567365 CLSTN2Q9H4D0 955 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 PDE11AQ9HCR9 933 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 ENTPD7Q9NQZ7 604 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 MAPK8IP1Q9UQF2 711 aa13.46□□□□□ -0.25
RNF40-211ENST00000567365 XPOTO43592 962 aaKnown RBP13.45□□□□□ -0.26
RNF40-211ENST00000567365 TADA2AO75478 443 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 CSPG5O95196 566 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 KIF20AO95235 890 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 CNPP09543 421 aaKnown RBP13.45□□□□□ -0.26
RNF40-211ENST00000567365 CD44P16070 742 aaKnown RBP13.45□□□□□ -0.26
RNF40-211ENST00000567365 BRCC3P46736 316 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 CASP4P49662 377 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 CYP2J2P51589 502 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 CLDN10P78369 228 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 CYP24A1Q07973 514 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 ELAVL2Q12926 359 aaKnown RBP13.45□□□□□ -0.26
RNF40-211ENST00000567365 ADAM15Q13444 863 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 PSMD6Q15008 389 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 USP41Q3LFD5 358 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 C9orf57Q5W0N0 161 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 SCARA3Q6AZY7 606 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 EFHBQ8N7U6 833 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 GPT2Q8TD30 523 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 ATXN2LQ8WWM7 1075 aaKnown RBP13.45□□□□□ -0.26
RNF40-211ENST00000567365 PIK3R5Q8WYR1 880 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 BORCS6Q96GS4 357 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 FAM84AQ96KN4 292 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 SUSD3Q96L08 255 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 B3GALT6Q96L58 329 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 CDCA3Q99618 268 aaPredicted RBP13.45□□□□□ -0.26
RNF40-211ENST00000567365 GTPBP4Q9BZE4 634 aaKnown RBP13.45□□□□□ -0.26
RNF40-211ENST00000567365 TLE6Q9H808 572 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 INTS13Q9NVM9 706 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 KIAA1468Q9P260 1216 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 TSC2P49815 1807 aa13.45□□□□□ -0.26
RNF40-211ENST00000567365 PPP1R3GB7ZBB8 358 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 I3L4J1 428 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 M0QZQ0 153 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 PER2O15055 1255 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 MAPK13O15264 365 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms