RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 SMAD2Q15796 467 aaKnown RBP18.13■□□□□ 0.49
CLN6-208ENST00000567060 SNRNP35Q16560 246 aaKnown RBP18.13■□□□□ 0.49
CLN6-208ENST00000567060 STX1AQ16623 288 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 ISM2Q6H9L7 571 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 CEP63Q96MT8 703 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 UROC1Q96N76 676 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 RBAKQ9NYW8 714 aaPredicted RBP18.13■□□□□ 0.49
CLN6-208ENST00000567060 UBQLN1Q9UMX0 589 aaKnown RBP18.13■□□□□ 0.49
CLN6-208ENST00000567060 INPP5FQ9Y2H2 1132 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 PDCD11Q14690 1871 aaKnown RBP18.12■□□□□ 0.49
CLN6-208ENST00000567060 SMIM28A0A1B0GU29 152 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 CD44P16070 742 aaKnown RBP18.12■□□□□ 0.49
CLN6-208ENST00000567060 BMPR1AP36894 532 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 TNFSF9P41273 254 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 SCNN1GP51170 649 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 CYP2J2P51589 502 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 TUSC3Q13454 348 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 CLUL1Q15846 466 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 NELFBQ8WX92 580 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 SAAL1Q96ER3 474 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 DDX27Q96GQ7 796 aaKnown RBP18.12■□□□□ 0.49
CLN6-208ENST00000567060 ZFP42Q96MM3 310 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 PPP1R10Q96QC0 940 aaKnown RBP18.12■□□□□ 0.49
CLN6-208ENST00000567060 IKZF4Q9H2S9 585 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 PCIF1Q9H4Z3 704 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 CWH43Q9H720 699 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 MUTYHQ9UIF7 546 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 PCDHB12Q9Y5F1 795 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 TECTAO75443 2155 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 NLRC5Q86WI3 1866 aa18.12■□□□□ 0.49
CLN6-208ENST00000567060 ATG2AQ2TAZ0 1938 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 TRIP11Q15643 1979 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 CFAP54Q96N23 3096 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 PTGESO14684 152 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 SLC16A3O15427 465 aaKnown RBP18.11■□□□□ 0.49
CLN6-208ENST00000567060 MBTPS2O43462 519 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 NCK2O43639 380 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 GNA14O95837 355 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 CCDC192P0DO97 292 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 RPL9P32969 192 aaKnown RBP18.11■□□□□ 0.49
CLN6-208ENST00000567060 GTF2F1P35269 517 aaKnown RBP eCLIP18.11■□□□□ 0.491e-6■■■■□ 26
CLN6-208ENST00000567060 PSMC2P35998 433 aaKnown RBP18.11■□□□□ 0.49
CLN6-208ENST00000567060 ALDH7A1P49419 539 aaKnown RBP18.11■□□□□ 0.49
CLN6-208ENST00000567060 GATMP50440 423 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 AP3M2P53677 418 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 MCCD1P59942 119 aaPredicted RBP18.11■□□□□ 0.49
CLN6-208ENST00000567060 PSMD6Q15008 389 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 ZBTB6Q15916 424 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 PAN2Q504Q3 1202 aaKnown RBP18.11■□□□□ 0.49
CLN6-208ENST00000567060 TTI2Q6NXR4 508 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 INTS8Q75QN2 995 aaKnown RBP18.11■□□□□ 0.49
CLN6-208ENST00000567060 CACTINQ8WUQ7 758 aaKnown RBP18.11■□□□□ 0.49
CLN6-208ENST00000567060 MFSD14AQ96MC6 490 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 ZNF558Q96NG5 402 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 PHOX2BQ99453 314 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 KLK14Q9P0G3 267 aa18.11■□□□□ 0.49
CLN6-208ENST00000567060 MRPL42Q9Y6G3 142 aaKnown RBP18.11■□□□□ 0.49
CLN6-208ENST00000567060 LACTBL1A8MY62 500 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 CAVIN2O95810 425 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 POMCP01189 267 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 ALDH2P05091 517 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 EPB41P11171 864 aaKnown RBP18.1■□□□□ 0.49
CLN6-208ENST00000567060 PRKCSHP14314 528 aaPredicted RBP18.1■□□□□ 0.49
CLN6-208ENST00000567060 CTNNB1P35222 781 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 CYP24A1Q07973 514 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 CAMK1Q14012 370 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 DPCR1Q3MIW9 517 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 SEZ6Q53EL9 994 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 ZBTB41Q5SVQ8 909 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 SPOUT1Q5T280 376 aaKnown RBP18.1■□□□□ 0.49
CLN6-208ENST00000567060 ANKRD40Q6AI12 368 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 KLHL10Q6JEL2 608 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 LRRC55Q6ZSA7 311 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 RNF135Q8IUD6 432 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 CBWD2Q8IUF1 395 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 COLGALT2Q8IYK4 626 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 BEST2Q8NFU1 509 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 TMC2Q8TDI7 906 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 FNBP1Q96RU3 617 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 NAT10Q9H0A0 1025 aaKnown RBP18.1■□□□□ 0.49
CLN6-208ENST00000567060 NRDE2Q9H7Z3 1164 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 METTL14Q9HCE5 456 aaKnown RBP18.1■□□□□ 0.49
CLN6-208ENST00000567060 MIOSQ9NXC5 875 aa18.1■□□□□ 0.49
CLN6-208ENST00000567060 ANK1P16157 1881 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 GOLGA8IPA6NC78 632 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 GOLGA8JA6NMD2 632 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 TMEM189-UBE2V1I3L0A0 370 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 LINC01565O15544 149 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 TBX10O75333 385 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 UBE3AQ05086 875 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 TMEM132DQ14C87 1099 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 NAB2Q15742 525 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 CEP135Q66GS9 1140 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 KCNT2Q6UVM3 1135 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 FILIP1Q7Z7B0 1213 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 WDR49Q8IV35 697 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 NOC3LQ8WTT2 800 aaKnown RBP18.09■□□□□ 0.49
CLN6-208ENST00000567060 KIF12Q96FN5 646 aa18.09■□□□□ 0.49
CLN6-208ENST00000567060 C11orf84Q9BUA3 381 aaPredicted RBP18.09■□□□□ 0.49
CLN6-208ENST00000567060 LMAN2LQ9H0V9 348 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms