RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 ATF7IP2Q5U623 682 aa17.03■□□□□ 0.32
PALB2-205ENST00000567003 ZNF852Q6ZMS4 543 aa17.03■□□□□ 0.32
PALB2-205ENST00000567003 POLR3CQ9BUI4 534 aaPredicted RBP17.03■□□□□ 0.32
PALB2-205ENST00000567003 GDE1Q9NZC3 331 aa17.03■□□□□ 0.32
PALB2-205ENST00000567003 MAP1BP46821 2468 aaKnown RBP17.02■□□□□ 0.32
PALB2-205ENST00000567003 SMIM28A0A1B0GU29 152 aa17.02■□□□□ 0.32
PALB2-205ENST00000567003 ARHGEF37A1IGU5 675 aa17.02■□□□□ 0.32
PALB2-205ENST00000567003 DCDC2BA2VCK2 349 aa17.02■□□□□ 0.32
PALB2-205ENST00000567003 PRRG1O14668 218 aa17.02■□□□□ 0.32
PALB2-205ENST00000567003 SEC24AO95486 1093 aa17.02■□□□□ 0.32
PALB2-205ENST00000567003 PTPN2P17706 415 aa17.02■□□□□ 0.32
PALB2-205ENST00000567003 TGM1P22735 817 aa17.02■□□□□ 0.32
PALB2-205ENST00000567003 RPS9P46781 194 aaKnown RBP17.02■□□□□ 0.32
PALB2-205ENST00000567003 ECM1Q16610 540 aa17.02■□□□□ 0.32
PALB2-205ENST00000567003 ANKS3Q6ZW76 656 aa17.02■□□□□ 0.32
PALB2-205ENST00000567003 HS6ST3Q8IZP7 471 aa17.02■□□□□ 0.32
PALB2-205ENST00000567003 ZNF687Q8N1G0 1237 aa17.02■□□□□ 0.32
PALB2-205ENST00000567003 TMEM130Q8N3G9 435 aa17.02■□□□□ 0.32
PALB2-205ENST00000567003 ELSPBP1Q96BH3 223 aa17.02■□□□□ 0.32
PALB2-205ENST00000567003 ZSWIM3Q96MP5 696 aa17.02■□□□□ 0.32
PALB2-205ENST00000567003 NCANO14594 1321 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 PODXLO00592 558 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 NCAM2O15394 837 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 TDGF1P13385 188 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 GJA1P17302 382 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 ELF1P32519 619 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 ADCY1Q08828 1119 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 ZNF174Q15697 407 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 SLC8B1Q6J4K2 584 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 UROC1Q96N76 676 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 ZMAT2Q96NC0 199 aaKnown RBP17.01■□□□□ 0.31
PALB2-205ENST00000567003 NELL2Q99435 816 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 CDT1Q9H211 546 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 BRD9Q9H8M2 597 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 CYP4F11Q9HBI6 524 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 AVENQ9NQS1 362 aaPredicted RBP17.01■□□□□ 0.31
PALB2-205ENST00000567003 CDV3Q9UKY7 258 aaKnown RBP17.01■□□□□ 0.31
PALB2-205ENST00000567003 INSL5Q9Y5Q6 135 aa17.01■□□□□ 0.31
PALB2-205ENST00000567003 CITO14578 2027 aa17■□□□□ 0.31
PALB2-205ENST00000567003 TRAPPC3O43617 180 aa17■□□□□ 0.31
PALB2-205ENST00000567003 ABLIM3O94929 683 aa17■□□□□ 0.31
PALB2-205ENST00000567003 RPA1P27694 616 aa17■□□□□ 0.31
PALB2-205ENST00000567003 VIPR2P41587 438 aa17■□□□□ 0.31
PALB2-205ENST00000567003 ST3GAL1Q11201 340 aa17■□□□□ 0.31
PALB2-205ENST00000567003 TRIM29Q14134 588 aa17■□□□□ 0.31
PALB2-205ENST00000567003 PPP2R5AQ15172 486 aa17■□□□□ 0.31
PALB2-205ENST00000567003 VITQ6UXI7 678 aa17■□□□□ 0.31
PALB2-205ENST00000567003 ZNF461Q8TAF7 563 aa17■□□□□ 0.31
PALB2-205ENST00000567003 DNASE1L2Q92874 299 aa17■□□□□ 0.31
PALB2-205ENST00000567003 SECISBP2LQ93073 1101 aaKnown RBP17■□□□□ 0.31
PALB2-205ENST00000567003 C18orf25Q96B23 403 aaPredicted RBP17■□□□□ 0.31
PALB2-205ENST00000567003 IFT74Q96LB3 600 aa17■□□□□ 0.31
PALB2-205ENST00000567003 MRPS17Q9Y2R5 130 aaKnown RBP17■□□□□ 0.31
PALB2-205ENST00000567003 ZFHX4Q86UP3 3567 aa17■□□□□ 0.31
PALB2-205ENST00000567003 MEFVO15553 781 aaPredicted RBP16.99■□□□□ 0.31
PALB2-205ENST00000567003 TBC1D4O60343 1298 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 MOSPD3O75425 235 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 OR52Z1P0C646 297 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 GDI1P31150 447 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 GRM5P41594 1212 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 LMNB2Q03252 620 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 SPEM2Q0P670 501 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 ZNF568Q3ZCX4 644 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 PDZD4Q76G19 769 aaPredicted RBP16.99■□□□□ 0.31
PALB2-205ENST00000567003 RTL10Q7L3V2 364 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 ASB16Q96NS5 453 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 TRMT61BQ9BVS5 477 aaKnown RBP16.99■□□□□ 0.31
PALB2-205ENST00000567003 BHMT2Q9H2M3 363 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 CHRDQ9H2X0 955 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 ZFP14Q9HCL3 533 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 FBXL5Q9UKA1 691 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 GMEB2Q9UKD1 530 aa16.99■□□□□ 0.31
PALB2-205ENST00000567003 CCDC169A6NNP5 214 aa16.98■□□□□ 0.31
PALB2-205ENST00000567003 HARSP12081 509 aaKnown RBP16.98■□□□□ 0.31
PALB2-205ENST00000567003 ATF2P15336 505 aa16.98■□□□□ 0.31
PALB2-205ENST00000567003 CCT6AP40227 531 aaKnown RBP16.98■□□□□ 0.31
PALB2-205ENST00000567003 EFNA5P52803 228 aa16.98■□□□□ 0.31
PALB2-205ENST00000567003 YARSP54577 528 aaKnown RBP16.98■□□□□ 0.31
PALB2-205ENST00000567003 SATB1Q01826 763 aa16.98■□□□□ 0.31
PALB2-205ENST00000567003 ANKRD1Q15327 319 aa16.98■□□□□ 0.31
PALB2-205ENST00000567003 XKR4Q5GH76 650 aa16.98■□□□□ 0.31
PALB2-205ENST00000567003 ALKAL1Q6UXT8 129 aa16.98■□□□□ 0.31
PALB2-205ENST00000567003 TAS1R3Q7RTX0 852 aa16.98■□□□□ 0.31
PALB2-205ENST00000567003 TCEAL8Q8IYN2 117 aa16.98■□□□□ 0.31
PALB2-205ENST00000567003 GPR161Q8N6U8 529 aaKnown RBP16.98■□□□□ 0.31
PALB2-205ENST00000567003 ERMNQ8TAM6 284 aa16.98■□□□□ 0.31
PALB2-205ENST00000567003 ACO2Q99798 780 aaKnown RBP16.98■□□□□ 0.31
PALB2-205ENST00000567003 CCDC94Q9BW85 323 aaPredicted RBP16.98■□□□□ 0.31
PALB2-205ENST00000567003 TARS2Q9BW92 718 aaKnown RBP16.98■□□□□ 0.31
PALB2-205ENST00000567003 LMAN1LQ9HAT1 526 aa16.98■□□□□ 0.31
PALB2-205ENST00000567003 ZNF334Q9HCZ1 680 aaPredicted RBP16.98■□□□□ 0.31
PALB2-205ENST00000567003 CEP72Q9P209 647 aa16.98■□□□□ 0.31
PALB2-205ENST00000567003 TNFSF13BQ9Y275 285 aa16.98■□□□□ 0.31
PALB2-205ENST00000567003 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.98■□□□□ 0.31
PALB2-205ENST00000567003 PIAS3Q9Y6X2 628 aa16.98■□□□□ 0.31
PALB2-205ENST00000567003 PDCD11Q14690 1871 aaKnown RBP16.98■□□□□ 0.31
PALB2-205ENST00000567003 PRR5-ARHGAP8B1AHC4 643 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 K7ERI5 159 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 MYL4P12829 197 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 PEX3P56589 373 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms