RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 UROC1Q96N76 676 aa17.73■□□□□ 0.43
SCAMP2-208ENST00000566557 ENTPD7Q9NQZ7 604 aa17.73■□□□□ 0.43
SCAMP2-208ENST00000566557 MARCH5Q9NX47 278 aa17.73■□□□□ 0.43
SCAMP2-208ENST00000566557 PUF60Q9UHX1 559 aaKnown RBP17.73■□□□□ 0.43
SCAMP2-208ENST00000566557 UBQLN1Q9UMX0 589 aaKnown RBP17.73■□□□□ 0.43
SCAMP2-208ENST00000566557 CTNND2Q9UQB3 1225 aa17.73■□□□□ 0.43
SCAMP2-208ENST00000566557 PODXLO00592 558 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 LPXNO60711 386 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 KIF4AO95239 1232 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 ADRB2P07550 413 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 NR2F2P24468 414 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 PPP1R2P41236 205 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 CLCNKBP51801 687 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 GUCY2FP51841 1108 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 PLCB3Q01970 1234 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 ADSSL1Q8N142 457 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 GJD3Q8N144 294 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 TMEM130Q8N3G9 435 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 TRIML1Q8N9V2 468 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 SPPL3Q8TCT6 385 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 MICAL1Q8TDZ2 1067 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 LMAN2LQ9H0V9 348 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 ASB7Q9H672 318 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 PDE11AQ9HCR9 933 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 TLR9Q9NR96 1032 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 TRAF3IP3Q9Y228 551 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 ATG2AQ2TAZ0 1938 aa17.72■□□□□ 0.43
SCAMP2-208ENST00000566557 TRIM49BA6NDI0 452 aa17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 TADA2AO75478 443 aa17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 CD44P16070 742 aaKnown RBP17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 BMP6P22004 513 aa17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 DNAJB1P25685 340 aa17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 SSTR3P32745 418 aaPredicted RBP17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 WNT7BP56706 349 aa17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 TFAMQ00059 246 aaKnown RBP17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 UBE3AQ05086 875 aa17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 COBLL1Q53SF7 1204 aa17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 PLPP4Q5VZY2 271 aa17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 LMBRD2Q68DH5 695 aaPredicted RBP17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 TMC7Q7Z402 723 aa17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 EFCAB13Q8IY85 973 aa17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 MRPL38Q96DV4 380 aaKnown RBP17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 FNBP1Q96RU3 617 aa17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 ADAM28Q9UKQ2 775 aa17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 FRMD4BQ9Y2L6 1034 aa17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 DERAQ9Y315 318 aa17.71■□□□□ 0.43
SCAMP2-208ENST00000566557 B3GAT3O94766 335 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 TMEM191BP0C7N4 346 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 DLATP10515 647 aaKnown RBP17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 PTMSP20962 102 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 RPL13P26373 211 aaKnown RBP17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 POU5F1Q01860 360 aaKnown RBP17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 CYP24A1Q07973 514 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 SURF1Q15526 300 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 CCDC183Q5T5S1 534 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 FUT10Q6P4F1 479 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 SLC9A9Q8IVB4 645 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 VPS52Q8N1B4 723 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 NELFBQ8WX92 580 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 CCDC127Q96BQ5 260 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 DDX27Q96GQ7 796 aaKnown RBP17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 TSPAN18Q96SJ8 248 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 TCF25Q9BQ70 676 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 LZTS1Q9Y250 596 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 C2CD2Q9Y426 696 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 NUB1Q9Y5A7 615 aa17.7■□□□□ 0.42
SCAMP2-208ENST00000566557 SF3B1O75533 1304 aaKnown RBP eCLIP17.7■□□□□ 0.424e-10■■■■■ 40.1
SCAMP2-208ENST00000566557 ALADP13716 330 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 CCNE1P24864 410 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 IRS1P35568 1242 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 CASP4P49662 377 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 STX17P56962 302 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 NHLH1Q02575 133 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 PAK1Q13153 545 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 UPP1Q16831 310 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 EDRF1Q3B7T1 1238 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 ZCWPW2Q504Y3 356 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 TIGD5Q53EQ6 642 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 SPATA1Q5VX52 437 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 CENPPQ6IPU0 288 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 DDX53Q86TM3 631 aaKnown RBP17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 EEF2KMTQ96G04 330 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 DHTKD1Q96HY7 919 aaPredicted RBP17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 ANKRD36BP1Q96IX9 119 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 FAM84AQ96KN4 292 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 FBXL18Q96ME1 805 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 DMAC2Q9NW81 257 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 LMCD1Q9NZU5 365 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 PCDHGC5Q9Y5F6 944 aa17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.69■□□□□ 0.42
SCAMP2-208ENST00000566557 PPP1R3GB7ZBB8 358 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 CETN3O15182 167 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 TNNC2P02585 160 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 URODP06132 367 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 TNNI1P19237 187 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 CYP3A5P20815 502 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 RPL9P32969 192 aaKnown RBP17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 PMS1P54277 932 aaKnown RBP17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 ERVFC1P60507 584 aa17.68■□□□□ 0.42
SCAMP2-208ENST00000566557 LRRC63Q05C16 580 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms