RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 LDHAP00338 332 aaKnown RBP20■□□□□ 0.79
MSLN-207ENST00000566549 GJB1P08034 283 aa20■□□□□ 0.79
MSLN-207ENST00000566549 RARAP10276 462 aa20■□□□□ 0.79
MSLN-207ENST00000566549 GNA15P30679 374 aa20■□□□□ 0.79
MSLN-207ENST00000566549 NF2P35240 595 aa20■□□□□ 0.79
MSLN-207ENST00000566549 IREB2P48200 963 aaKnown RBP20■□□□□ 0.79
MSLN-207ENST00000566549 CLUL1Q15846 466 aa20■□□□□ 0.79
MSLN-207ENST00000566549 PRRT2Q7Z6L0 340 aaPredicted RBP20■□□□□ 0.79
MSLN-207ENST00000566549 TMBIM4Q9HC24 238 aa20■□□□□ 0.79
MSLN-207ENST00000566549 LCMT1Q9UIC8 334 aa20■□□□□ 0.79
MSLN-207ENST00000566549 RASAL2Q9UJF2 1139 aa20■□□□□ 0.79
MSLN-207ENST00000566549 ADGRA2Q96PE1 1338 aa19.99■□□□□ 0.79
MSLN-207ENST00000566549 FAM187AA6NFU0 413 aa19.99■□□□□ 0.79
MSLN-207ENST00000566549 MYO1FO00160 1098 aa19.99■□□□□ 0.79
MSLN-207ENST00000566549 NOP56O00567 594 aaKnown RBP19.99■□□□□ 0.79
MSLN-207ENST00000566549 KIAA0391O15091 583 aaKnown RBP19.99■□□□□ 0.79
MSLN-207ENST00000566549 MAFO75444 373 aaPredicted RBP19.99■□□□□ 0.79
MSLN-207ENST00000566549 NCOA4Q13772 614 aa19.99■□□□□ 0.79
MSLN-207ENST00000566549 RNF149Q8NC42 400 aa19.99■□□□□ 0.79
MSLN-207ENST00000566549 COPS5Q92905 334 aa19.99■□□□□ 0.79
MSLN-207ENST00000566549 ZDHHC18Q9NUE0 388 aa19.99■□□□□ 0.79
MSLN-207ENST00000566549 RNF181Q9P0P0 153 aa19.99■□□□□ 0.79
MSLN-207ENST00000566549 EIF3HO15372 352 aaKnown RBP eCLIP19.98■□□□□ 0.79
MSLN-207ENST00000566549 GJB6O95452 261 aa19.98■□□□□ 0.79
MSLN-207ENST00000566549 CLTAP09496 248 aa19.98■□□□□ 0.79
MSLN-207ENST00000566549 ENPEPQ07075 957 aa19.98■□□□□ 0.79
MSLN-207ENST00000566549 LRIG3Q6UXM1 1119 aa19.98■□□□□ 0.79
MSLN-207ENST00000566549 CDR2LQ86X02 465 aaPredicted RBP19.98■□□□□ 0.79
MSLN-207ENST00000566549 RBBP8NLQ8NC74 664 aaPredicted RBP19.98■□□□□ 0.79
MSLN-207ENST00000566549 BCAS4Q8TDM0 211 aa19.98■□□□□ 0.79
MSLN-207ENST00000566549 C1orf54Q8WWF1 131 aa19.98■□□□□ 0.79
MSLN-207ENST00000566549 ANKRD65E5RJM6 399 aa19.98■□□□□ 0.79
MSLN-207ENST00000566549 O00370 1275 aa19.98■□□□□ 0.79
MSLN-207ENST00000566549 PPFIA4O75335 1185 aa19.98■□□□□ 0.79
MSLN-207ENST00000566549 CST3P01034 146 aaPredicted RBP19.98■□□□□ 0.79
MSLN-207ENST00000566549 RPL21P46778 160 aaKnown RBP19.98■□□□□ 0.79
MSLN-207ENST00000566549 SKOR1P84550 965 aa19.98■□□□□ 0.79
MSLN-207ENST00000566549 MTMR3Q13615 1198 aa19.98■□□□□ 0.79
MSLN-207ENST00000566549 MTMR12Q9C0I1 747 aa19.98■□□□□ 0.79
MSLN-207ENST00000566549 MTUS1Q9ULD2 1270 aa19.98■□□□□ 0.79
MSLN-207ENST00000566549 THAP12O43422 761 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 HSPA6P17066 643 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 CD58P19256 250 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 BPIFB4P59827 614 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 OSTNP61366 133 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 LAMTOR4Q0VGL1 99 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 SNX1Q13596 522 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 ZNF394Q53GI3 561 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 ZDHHC24Q6UX98 284 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 KDM7AQ6ZMT4 941 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 FAM81BQ96LP2 452 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 GPR20Q99678 358 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 MAF1Q9H063 256 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 TMEM134Q9H6X4 195 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 HMGB1P1B2RPK0 211 aaPredicted RBP19.97■□□□□ 0.79
MSLN-207ENST00000566549 MSCO60682 206 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 CYP1A1P04798 512 aaPredicted RBP19.97■□□□□ 0.79
MSLN-207ENST00000566549 GJC1P36383 396 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 COILP38432 576 aaPredicted RBP19.97■□□□□ 0.79
MSLN-207ENST00000566549 CENPCQ03188 943 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 SIX1Q15475 284 aaPredicted RBP19.97■□□□□ 0.79
MSLN-207ENST00000566549 MMS22LQ6ZRQ5 1243 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 ZNF677Q86XU0 584 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 RHPN2Q8IUC4 686 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 FGD4Q96M96 766 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 GRHL1Q9NZI5 618 aa19.97■□□□□ 0.79
MSLN-207ENST00000566549 SOCS7O14512 581 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 TGFB3P10600 412 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 CCT5P48643 541 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 IFFO1Q0D2I5 559 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 MON1BQ7L1V2 547 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 ATG4AQ8WYN0 398 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 NLRP4Q96MN2 994 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 SPATA33Q96N06 139 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.96■□□□□ 0.79
MSLN-207ENST00000566549 ADAM22Q9P0K1 906 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 PCYOX1Q9UHG3 505 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 ERLIN2O94905 339 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 SSR1P43307 286 aaKnown RBP19.96■□□□□ 0.79
MSLN-207ENST00000566549 KRT71Q3SY84 523 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 UBAP2Q5T6F2 1119 aaKnown RBP19.96■□□□□ 0.79
MSLN-207ENST00000566549 ERO1BQ86YB8 467 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 ABRAQ8N0Z2 381 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 HERPUD2Q9BSE4 406 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 MRPL4Q9BYD3 311 aaKnown RBP19.96■□□□□ 0.79
MSLN-207ENST00000566549 RBPJLQ9UBG7 517 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 USTQ9Y2C2 406 aa19.96■□□□□ 0.79
MSLN-207ENST00000566549 ZNFX1Q9P2E3 1918 aaKnown RBP19.96■□□□□ 0.79
MSLN-207ENST00000566549 PPFIA2O75334 1257 aa19.95■□□□□ 0.78
MSLN-207ENST00000566549 PRKCBP05771 671 aa19.95■□□□□ 0.78
MSLN-207ENST00000566549 NOMO3P69849 1222 aa19.95■□□□□ 0.78
MSLN-207ENST00000566549 KCTD2Q14681 263 aa19.95■□□□□ 0.78
MSLN-207ENST00000566549 BRSK2Q8IWQ3 736 aa19.95■□□□□ 0.78
MSLN-207ENST00000566549 IMPG2Q9BZV3 1241 aa19.95■□□□□ 0.78
MSLN-207ENST00000566549 LOC285556D6RIA3 1793 aa19.95■□□□□ 0.78
MSLN-207ENST00000566549 DCDC2CA8MYV0 355 aa19.95■□□□□ 0.78
MSLN-207ENST00000566549 ZBTB42B2RXF5 422 aa19.95■□□□□ 0.78
MSLN-207ENST00000566549 TOM1L1O75674 476 aa19.95■□□□□ 0.78
MSLN-207ENST00000566549 SHBGP04278 402 aa19.95■□□□□ 0.78
MSLN-207ENST00000566549 MYL6P60660 151 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms